CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 1
mitochondrion 3
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	golgi, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra022628.1-P	Field mustard	cytosol, mitochondrion	84.09	92.27
CDY27027	Canola	golgi, mitochondrion, nucleus	89.32	87.72
AT5G53090.1	Thale cress	cytosol	72.05	84.53
CDX92838	Canola	cytosol	54.77	75.31
CDX89228	Canola	cytosol, nucleus, peroxisome	63.64	75.07
CDY19025	Canola	cytosol	63.64	75.07
VIT_17s0000g00520.t01	Wine grape	cytosol, mitochondrion, peroxisome	60.68	71.97
CDY70072	Canola	cytosol	25.91	68.26
CDY64354	Canola	cytosol	34.55	66.96
KRH09442	Soybean	cytosol	57.05	66.58
PGSC0003DMT400026316	Potato	cytosol	58.18	66.49
KRH38907	Soybean	endoplasmic reticulum	57.05	66.4
Solyc03g098460.2.1	Tomato	cytosol	57.95	66.23
CDY29859	Canola	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	53.64	64.48
GSMUA_Achr7P04190_001	Banana	cytosol	55.0	59.02
Os02t0116500-01	Rice	cytosol	53.64	59.0
TraesCS6A01G045200.1	Wheat	cytosol	52.95	57.39
TraesCS6D01G051500.1	Wheat	cytosol	52.73	56.72
Zm00001d054039_P001	Maize	cytosol	53.41	56.49
TraesCS6B01G060600.1	Wheat	cytosol	52.5	56.2
EES04360	Sorghum	cytosol	53.41	55.56
Zm00001d014994_P001	Maize	cytosol	51.82	47.9
CDX88292	Canola	cytosol	12.73	35.67
CDY53896	Canola	plastid	15.23	33.5
CDX76338	Canola	cytosol, plastid	24.09	32.92
CDY72089	Canola	cytosol	15.0	32.84
CDY72311	Canola	cytosol	15.0	32.67
CDY69917	Canola	endoplasmic reticulum	22.27	32.13
CDY10884	Canola	plastid	23.18	31.68
CDY38726	Canola	cytosol, golgi, plastid	59.55	31.49
CDY10441	Canola	cytosol, extracellular, mitochondrion, plastid	9.77	31.39
CDY18436	Canola	cytosol	22.5	30.84
CDX81232	Canola	cytosol	22.5	30.84
CDY52816	Canola	cytosol	21.82	30.0
CDY52817	Canola	cytosol	21.82	30.0
CDX74954	Canola	cytosol	21.82	30.0
CDY44096	Canola	mitochondrion, plastid	23.41	28.53
CDY13264	Canola	cytosol	20.23	28.08
CDX86777	Canola	cytosol	20.0	27.76
CDX76323	Canola	cytosol	20.91	27.71
CDY10985	Canola	cytosol	20.91	27.71
CDY10440	Canola	plastid	20.45	27.69
CDY40365	Canola	mitochondrion	20.45	27.19
CDY50440	Canola	mitochondrion	20.68	26.84
CDY55418	Canola	cytosol	18.18	26.76
CDY53433	Canola	plastid	21.14	26.72
CDY11217	Canola	mitochondrion	20.0	26.59
CDY68648	Canola	cytosol	10.68	22.49
CDX89249	Canola	plastid	19.32	21.41
CDY29311	Canola	plastid	19.32	21.41
CDY18175	Canola	plastid	19.09	21.0
CDY14325	Canola	plastid	19.09	20.79
CDX89877	Canola	plastid	18.86	20.75
CDY51384	Canola	plastid	18.64	20.6
CDY15470	Canola	plastid	18.64	20.6
CDX71585	Canola	mitochondrion	14.55	18.88
CDX98171	Canola	plastid	14.77	18.62
CDY18309	Canola	plastid	14.77	18.62
CDY37755	Canola	mitochondrion, plastid	20.0	14.13
CDY29840	Canola	plastid	19.09	13.27
CDX92832	Canola	plastid	18.86	13.03
CDY47833	Canola	cytosol, nucleus, plastid	21.36	10.55
CDY08387	Canola	cytosol, nucleus, plastid	21.36	10.55

Protein Annotations

EnsemblPlants:CDX96191	EnsemblPlantsGene:GSBRNA2T00102263001	Gene3D:3.40.50.720	GO:A0A078E4G3	InterPro:NAD(P)-bd_dom_sf	InterPro:SDR_fam
PANTHER:PTHR24320	PANTHER:PTHR24320:SF73	PFAM:PF00106	PRINTS:PR00080	PRINTS:PR00081	ProteinID:CDX96191
ProteinID:CDX96191.1	SEG:seg	SUPFAM:SSF51735	UniParc:UPI0004EEABAD	MapMan:35.1	:

Description

BnaC02g14600D

Coordinates

chrLK031893:+:387467..390678

Molecular Weight (calculated)

48994.3 Da

IEP (calculated)

8.842

GRAVY (calculated)

-0.115

Length

440 amino acids

Sequence
(BLAST)

001: MSSGTRRMKT KNKKKEGLGW MEWIRGWACV FHEFLFQRFM SSHLPNPLPL PPLSHLTCIV TGSTSGIGRE TARQLAEAGA HVVMAVRNTK AAHDLIQQWQ
101: RDWSAKGLPL NIEAMELDLL SLDSVVNFSN AWNARLAPLH VLINNAGIFA MGEEQKFSKD GYEHHMQVNH LAPALLSLLL LPSLNRASPS RIINVNSVMH
201: YVGFVDPDDM NVVSGRRKFS SLVGYSGSKL AQVMFSNVLF KRLPLESRIS VVCLSPGIVL TNVARDLPRS VQVQYALIPY FIFSPQKGCR SSLFSATDAQ
301: IPEHCEKLKT GDKPICTFIS QDCKHTKPSE EAQSLETANR VWEKTVEMIG LPLDALERLI QGQEMFLELD LSIKHILKDE GSVSGNSFSQ LAEAGAHVVM
401: AVRNMKAANA LIQQWRTKWS ASGTGHPLNI TIDQLYSTYT

Best Arabidopsis Sequence Match ( AT5G53090.1 )
(BLAST)

001: MSSETSSLTK KMKKKKEGLG WIESIKGWSC VFHEFLFQRF MASHLQNPLP LPSLNHLTCI VTGSTSGIGR ETARQLAEAG ARVVMAVRNT KAAHELIQQW
101: QKEWSGKGIP LNLEAMELDL LSLDSVVGFC NLWNARLSPL HVLINNAGIF SMGEEQKFSK DGYEQHMQVN HLAPALLSLL LLPSLIRGSP SRIINVNSVM
201: HYVGFVDPDD MNVVSGKRKF TSLVGYSGSK LAQVMFSNVL LKRLPLETRI SVVCLSPGIV LTNVARDLPR YVQVQYALIP YFIFSPQEGS RSTLFSATDA
301: QIPEHCEKLK TEDKPVCTFI SQNCKHTKPS EEAHNVETAE RVWEKTIKLI GLPLDAVERL IEGEEVQCRY GTHQQ

Arabidopsis Description

At5g53090 [Source:UniProtKB/TrEMBL;Acc:Q66GR1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.