Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 3
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX89228 | Canola | cytosol, nucleus, peroxisome | 91.25 | 78.28 |
| CDY19025 | Canola | cytosol | 91.25 | 78.28 |
| AT4G27760.1 | Thale cress | cytosol | 91.56 | 77.93 |
| CDY29859 | Canola | endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole | 86.56 | 75.68 |
| VIT_17s0000g00520.t01 | Wine grape | cytosol, mitochondrion, peroxisome | 77.5 | 66.85 |
| CDY70072 | Canola | cytosol | 32.81 | 62.87 |
| PGSC0003DMT400026316 | Potato | cytosol | 75.31 | 62.6 |
| Solyc03g098460.2.1 | Tomato | cytosol | 75.0 | 62.34 |
| KRH09442 | Soybean | cytosol | 71.88 | 61.01 |
| KRH38907 | Soybean | endoplasmic reticulum | 71.56 | 60.58 |
| CDY64354 | Canola | cytosol | 40.0 | 56.39 |
| GSMUA_Achr7P04190_001 | Banana | cytosol | 70.94 | 55.37 |
| CDX96191 | Canola | mitochondrion | 75.31 | 54.77 |
| Os02t0116500-01 | Rice | cytosol | 68.12 | 54.5 |
| CDY27027 | Canola | golgi, mitochondrion, nucleus | 75.62 | 54.02 |
| TraesCS6A01G045200.1 | Wheat | cytosol | 68.44 | 53.94 |
| TraesCS6D01G051500.1 | Wheat | cytosol | 68.75 | 53.79 |
| TraesCS6B01G060600.1 | Wheat | cytosol | 68.75 | 53.53 |
| Zm00001d054039_P001 | Maize | cytosol | 68.75 | 52.88 |
| EES04360 | Sorghum | cytosol | 68.44 | 51.77 |
| Zm00001d014994_P001 | Maize | cytosol | 66.25 | 44.54 |
| CDX88292 | Canola | cytosol | 16.88 | 34.39 |
| CDY53896 | Canola | plastid | 20.31 | 32.5 |
| CDY72089 | Canola | cytosol | 19.69 | 31.34 |
| CDY72311 | Canola | cytosol | 19.69 | 31.19 |
| CDX76338 | Canola | cytosol, plastid | 30.62 | 30.43 |
| CDY10441 | Canola | cytosol, extracellular, mitochondrion, plastid | 12.81 | 29.93 |
| CDY69917 | Canola | endoplasmic reticulum | 28.44 | 29.84 |
| CDY10884 | Canola | plastid | 30.0 | 29.81 |
| CDY18436 | Canola | cytosol | 29.06 | 28.97 |
| CDX81232 | Canola | cytosol | 29.06 | 28.97 |
| CDY52817 | Canola | cytosol | 28.44 | 28.44 |
| CDX74954 | Canola | cytosol | 28.12 | 28.12 |
| CDY52816 | Canola | cytosol | 28.12 | 28.12 |
| CDY38726 | Canola | cytosol, golgi, plastid | 71.25 | 27.4 |
| CDY13264 | Canola | cytosol | 26.88 | 27.13 |
| CDY44096 | Canola | mitochondrion, plastid | 30.31 | 26.87 |
| CDX86777 | Canola | cytosol | 26.56 | 26.81 |
| CDY10985 | Canola | cytosol | 27.81 | 26.81 |
| CDX76323 | Canola | cytosol | 27.5 | 26.51 |
| CDY10440 | Canola | plastid | 26.88 | 26.46 |
| CDY40365 | Canola | mitochondrion | 27.19 | 26.28 |
| CDY50440 | Canola | mitochondrion | 27.81 | 26.25 |
| CDY55418 | Canola | cytosol | 24.38 | 26.09 |
| CDY53433 | Canola | plastid | 28.12 | 25.86 |
| CDY11217 | Canola | mitochondrion | 26.56 | 25.68 |
| CDY18175 | Canola | plastid | 27.19 | 21.75 |
| CDX89249 | Canola | plastid | 26.88 | 21.66 |
| CDY14325 | Canola | plastid | 27.19 | 21.53 |
| CDY68648 | Canola | cytosol | 14.06 | 21.53 |
| CDY29311 | Canola | plastid | 26.56 | 21.41 |
| CDY51384 | Canola | plastid | 26.56 | 21.36 |
| CDY15470 | Canola | plastid | 26.56 | 21.36 |
| CDX89877 | Canola | plastid | 26.56 | 21.25 |
| CDX98171 | Canola | plastid | 21.25 | 19.48 |
| CDY18309 | Canola | plastid | 21.25 | 19.48 |
| CDX71585 | Canola | mitochondrion | 18.44 | 17.4 |
| CDY29840 | Canola | plastid | 27.81 | 14.06 |
| CDX92832 | Canola | plastid | 27.5 | 13.81 |
| CDY37755 | Canola | mitochondrion, plastid | 26.25 | 13.48 |
| CDY08387 | Canola | cytosol, nucleus, plastid | 28.44 | 10.21 |
| CDY47833 | Canola | cytosol, nucleus, plastid | 28.12 | 10.1 |
Protein Annotations
| EnsemblPlants:CDX92838 | EnsemblPlantsGene:GSBRNA2T00154671001 | Gene3D:3.40.50.720 | GO:A0A078DZU2 | InterPro:NAD(P)-bd_dom_sf | InterPro:SDR_fam |
| PANTHER:PTHR24320 | PANTHER:PTHR24320:SF73 | PFAM:PF00106 | PRINTS:PR00080 | PRINTS:PR00081 | ProteinID:CDX92838 |
| ProteinID:CDX92838.1 | SEG:seg | SUPFAM:SSF51735 | UniParc:UPI0004EE4223 | MapMan:35.1 | : |
Description
BnaC07g40960D
Coordinates
chrLK031873:+:1057328..1059649
Molecular Weight (calculated)
35113.4 Da
IEP (calculated)
6.792
GRAVY (calculated)
-0.013
Length
320 amino acids
Sequence
(BLAST)
(BLAST)
001: MEWMRGWSSV FGEILFQRIT ASHLHNPLPL PPVNGLTCVV TGSTNGIGRQ TARQLAEAGA HVVMAVRNTK AAQELIQQWQ NEWSGKGLPL NVEAMELDLL
101: SLDSVARFAD AWNARLGPLH VLINNAGIFA MGEAQKFSED GYEQHMQVNH LAPALLSVLL LPSLIRGSPS RIINVNSVMH SVGFVDPDDM NVVSGRRKYS
201: SVVGYSSSKL AQMSLPSILF KKLPLETGVS VICLSPGVVL TNVARDLPRI LQALYAVIPY FIFSPQEDCR PTNPSEEAHN TETAHRVWKK TLELVGLPVG
301: AVEKLIEGEN VQCRYGSQQE
101: SLDSVARFAD AWNARLGPLH VLINNAGIFA MGEAQKFSED GYEQHMQVNH LAPALLSVLL LPSLIRGSPS RIINVNSVMH SVGFVDPDDM NVVSGRRKYS
201: SVVGYSSSKL AQMSLPSILF KKLPLETGVS VICLSPGVVL TNVARDLPRI LQALYAVIPY FIFSPQEDCR PTNPSEEAHN TETAHRVWKK TLELVGLPVG
301: AVEKLIEGEN VQCRYGSQQE
001: MSDETTSSPS PAPAKKKQNL GWMEWMRGWS SVFGEILFQR ITASHLENPL PLPSVNDLTC VVTGSTSGIG RETARQLAEA GAHVVMAVRN TKAAQELILQ
101: WQNEWSGKGL PLNIEAMEID LLSLDSVARF AEAFNARLGP LHVLINNAGM FAMGEAQKFS EEGYEQHMQV NHLAPALLSV LLLPSLIRGS PSRIINVNSV
201: MHSVGFVDPD DMNVVSGRRK YSSLIGYSSS KLAQIMFSSI LFKKLPLETG VSVVCLSPGV VLTNVARDLS RILQALYAVI PYFIFSPQEG CRSSLFSATD
301: PQIPEYWETL KNDDWPVCPF ISQDCRPANP SEEAHNTETA QRVWKKTLEL VGLPLDAVEK LIEGENIQCR YGAQHE
101: WQNEWSGKGL PLNIEAMEID LLSLDSVARF AEAFNARLGP LHVLINNAGM FAMGEAQKFS EEGYEQHMQV NHLAPALLSV LLLPSLIRGS PSRIINVNSV
201: MHSVGFVDPD DMNVVSGRRK YSSLIGYSSS KLAQIMFSSI LFKKLPLETG VSVVCLSPGV VLTNVARDLS RILQALYAVI PYFIFSPQEG CRSSLFSATD
301: PQIPEYWETL KNDDWPVCPF ISQDCRPANP SEEAHNTETA QRVWKKTLEL VGLPLDAVEK LIEGENIQCR YGAQHE
Arabidopsis Description
FEYDehydrogenase/reductase SDR family member FEY [Source:UniProtKB/Swiss-Prot;Acc:F4JJR8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.