CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
mitochondrion 2
cytosol 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY68648	Canola	cytosol	64.21	91.87
CDY40365	Canola	mitochondrion	89.97	81.27
AT5G02540.1	Thale cress	mitochondrion	88.96	80.36
CDY10440	Canola	plastid	86.62	79.69
CDY11217	Canola	mitochondrion	87.63	79.15
CDX81232	Canola	cytosol	65.89	61.37
CDY18436	Canola	cytosol	65.55	61.06
VIT_08s0040g03400.t01	Wine grape	plastid	65.89	60.8
Solyc10g086390.1.1	Tomato	mitochondrion	65.55	60.68
CDY52816	Canola	cytosol	64.88	60.62
CDY52817	Canola	cytosol	64.55	60.31
CDX74954	Canola	cytosol	64.55	60.31
PGSC0003DMT400049292	Potato	mitochondrion	64.55	59.75
GSMUA_Achr8P20890_001	Banana	cytosol, mitochondrion, plastid	63.88	59.69
PGSC0003DMT400022813	Potato	mitochondrion	63.88	59.69
KRH19708	Soybean	nucleus	64.21	59.44
GSMUA_Achr11P...	Banana	cytosol	63.88	58.95
GSMUA_Achr7P15240_001	Banana	plastid	63.88	58.95
GSMUA_Achr10P...	Banana	cytosol, mitochondrion, plastid	63.21	58.88
Solyc09g010510.2.1	Tomato	cytosol, mitochondrion, plastid	62.54	58.44
KRH32305	Soybean	plastid	62.88	58.2
CDY10441	Canola	cytosol, extracellular, mitochondrion, plastid	26.42	57.66
KRH67540	Soybean	nucleus	61.87	57.28
KRG95813	Soybean	nucleus	61.54	56.97
Zm00001d039848_P002	Maize	cytosol, mitochondrion, plastid	60.54	56.56
EES02479	Sorghum	cytosol, plastid	59.87	55.94
TraesCS3B01G091800.3	Wheat	cytosol	58.86	55.0
Os01t0151700-01	Rice	cytosol	58.53	54.52
TraesCS5D01G287000.1	Wheat	plastid	58.53	54.35
TraesCS5B01G279400.1	Wheat	plastid	58.19	54.04
TraesCS5A01G280400.1	Wheat	plastid	57.86	53.73
Zm00001d039397_P001	Maize	cytosol	42.14	51.85
CDY69917	Canola	endoplasmic reticulum	52.51	51.48
TraesCS3A01G077400.2	Wheat	cytosol, plastid	57.19	48.86
CDY10884	Canola	plastid	52.17	48.45
HORVU3Hr1G013970.6	Barley	plastid	57.19	48.17
CDX76338	Canola	cytosol, plastid	51.51	47.83
CDX86777	Canola	cytosol	50.5	47.63
CDY13264	Canola	cytosol	50.5	47.63
CDX88292	Canola	cytosol	24.08	45.86
HORVU5Hr1G075530.8	Barley	cytosol, nucleus, plastid	57.19	44.07
CDY44096	Canola	mitochondrion, plastid	52.84	43.77
TraesCS3D01G077500.2	Wheat	cytosol, plastid	49.83	42.57
CDY10985	Canola	cytosol	45.48	40.96
CDY50440	Canola	mitochondrion	45.48	40.12
CDX76323	Canola	cytosol	44.48	40.06
CDY72311	Canola	cytosol	26.76	39.6
CDY72089	Canola	cytosol	26.42	39.3
CDY53433	Canola	plastid	44.82	38.51
CDY53896	Canola	plastid	25.75	38.5
CDX71585	Canola	mitochondrion	33.78	29.79
CDX92838	Canola	cytosol	26.09	24.38
CDY19025	Canola	cytosol	27.76	22.25
CDX89228	Canola	cytosol, nucleus, peroxisome	27.76	22.25
CDX89877	Canola	plastid	29.77	22.25
CDY18175	Canola	plastid	29.77	22.25
CDY70072	Canola	cytosol	12.37	22.16
CDY51384	Canola	plastid	29.43	22.11
CDY15470	Canola	plastid	29.43	22.11
CDY29311	Canola	plastid	28.76	21.66
CDX89249	Canola	plastid	28.76	21.66
CDY29859	Canola	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	25.75	21.04
CDY37755	Canola	mitochondrion, plastid	42.81	20.55
CDY14325	Canola	plastid	27.42	20.3
CDY18309	Canola	plastid	23.08	19.77
CDX98171	Canola	plastid	22.74	19.48
CDY64354	Canola	cytosol	14.72	19.38
CDX96191	Canola	mitochondrion	26.76	18.18
CDY27027	Canola	golgi, mitochondrion, nucleus	26.76	17.86
CDY08387	Canola	cytosol, nucleus, plastid	44.48	14.93
CDY47833	Canola	cytosol, nucleus, plastid	44.15	14.81
CDY29840	Canola	plastid	29.1	13.74
CDX92832	Canola	plastid	28.76	13.5
CDY38726	Canola	cytosol, golgi, plastid	26.42	9.5

Protein Annotations

EnsemblPlants:CDY55418	EnsemblPlantsGene:GSBRNA2T00016818001	Gene3D:3.40.50.720	GO:A0A078IYH3	InterPro:NAD(P)-bd_dom_sf	InterPro:SDR_fam
PANTHER:PTHR24320	PANTHER:PTHR24320:SF81	PFAM:PF00106	PRINTS:PR00080	PRINTS:PR00081	ProteinID:CDY55418
ProteinID:CDY55418.1	SUPFAM:SSF51735	UniParc:UPI0004EE4E16	UniProt:A0A078IYH3	MapMan:35.1	:

Description

BnaCnng28820DBnaCnng28820D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IYH3]

Coordinates

chrLK033400:-:37496..40904

Molecular Weight (calculated)

33130.8 Da

IEP (calculated)

9.053

GRAVY (calculated)

-0.093

Length

299 amino acids

Sequence
(BLAST)

001: MQRTKKAGGT GGIGMETARV LTKRGAHVVI GARNMGAAEN AKAEILRQNA NARVTLLYFD LSSFKSIKAF VNDFHALHLP LNLLINNAGL MFCPYQLSDD
101: GIELQFATNH IGHFLLTNLL LDTMKTTAKT SGVEGRILNI SSIAHIYTYQ EGIQFDSIND ISCYSDKKSY GQSKLANILH ANELSRQLQE EGVNITVNSV
201: HPGLILTNLF QHTALLMRFL KFFSFYLWKN IPQGAATTCY VALHPSLKGV TGKYFADCNE VNPTKLARDD TLAQNLWDFS VKLTNSVSKK NYLGFEDAS

Best Arabidopsis Sequence Match ( AT5G02540.1 )
(BLAST)

001: MGLYSLITGR RGPSGFGSAS TAEEVTQGID ATNLTAIITG GTGGIGMETA RVLSKRGAHV VIGARNMGAA ENAKTEILRQ NANARVTLLQ LDLSSIKSIK
101: AFVREFHALH LPLNLLINNA GVMFCPYQLS EDGIELQFAT NHIGHFLLTN LLLDTMKNTA KTSGVEGRIL NVSSVAHIYT YQEGIQFDSI NDICSYSDKR
201: AYGQSKLANI LHANELSRQL QEEGVNITAN SVHPGLILTN LFQHTALLMR FLKFFSFYLW KNIPQGAATT CYVALHPSVK GVTGKYFADC NEVTPSKLAR
301: DETLAQKLWD FSVKLINSVS KKNYLGFDDT T

Arabidopsis Description

NAD(P)-binding Rossmann-fold superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4KCF2]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.