Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- nucleus 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G279400.1 | Wheat | plastid | 81.19 | 97.83 |
| TraesCS5A01G280400.1 | Wheat | plastid | 79.64 | 95.96 |
| TraesCS5D01G287000.1 | Wheat | plastid | 79.64 | 95.96 |
| Zm00001d039848_P002 | Maize | cytosol, mitochondrion, plastid | 68.56 | 83.12 |
| EES02479 | Sorghum | cytosol, plastid | 68.56 | 83.12 |
| Os01t0151700-01 | Rice | cytosol | 67.01 | 81.0 |
| HORVU3Hr1G013970.6 | Barley | plastid | 69.33 | 75.77 |
| GSMUA_Achr10P... | Banana | cytosol, mitochondrion, plastid | 61.6 | 74.45 |
| GSMUA_Achr8P20890_001 | Banana | cytosol, mitochondrion, plastid | 61.08 | 74.06 |
| GSMUA_Achr7P15240_001 | Banana | plastid | 59.28 | 70.99 |
| PGSC0003DMT400049292 | Potato | mitochondrion | 58.76 | 70.59 |
| Solyc10g086390.1.1 | Tomato | mitochondrion | 57.99 | 69.66 |
| VIT_08s0040g03400.t01 | Wine grape | plastid | 57.99 | 69.44 |
| GSMUA_Achr11P... | Banana | cytosol | 57.99 | 69.44 |
| PGSC0003DMT400022813 | Potato | mitochondrion | 56.7 | 68.75 |
| Solyc09g010510.2.1 | Tomato | cytosol, mitochondrion, plastid | 56.19 | 68.12 |
| KRG95813 | Soybean | nucleus | 56.19 | 67.49 |
| KRH67540 | Soybean | nucleus | 55.93 | 67.18 |
| KRH32305 | Soybean | plastid | 54.38 | 65.33 |
| KRH19708 | Soybean | nucleus | 54.12 | 65.02 |
| CDX88292 | Canola | cytosol | 26.03 | 64.33 |
| Bra017180.1-P | Field mustard | cytosol | 53.09 | 64.17 |
| CDY18436 | Canola | cytosol | 52.84 | 63.86 |
| CDX81232 | Canola | cytosol | 52.58 | 63.55 |
| Bra005188.1-P | Field mustard | cytosol | 51.8 | 63.41 |
| Zm00001d039397_P001 | Maize | cytosol | 39.69 | 63.37 |
| CDY52816 | Canola | cytosol | 51.8 | 62.81 |
| CDX74954 | Canola | cytosol | 51.8 | 62.81 |
| AT2G37540.1 | Thale cress | cytosol | 51.8 | 62.62 |
| CDY52817 | Canola | cytosol | 51.55 | 62.5 |
| CDY10440 | Canola | plastid | 52.06 | 62.15 |
| CDY40365 | Canola | mitochondrion | 52.84 | 61.93 |
| Bra009580.1-P | Field mustard | mitochondrion | 52.58 | 61.63 |
| AT5G02540.1 | Thale cress | mitochondrion | 52.32 | 61.33 |
| CDY11217 | Canola | mitochondrion | 51.8 | 60.73 |
| Bra005729.1-P | Field mustard | mitochondrion | 51.8 | 60.73 |
| CDY68648 | Canola | cytosol | 32.22 | 59.81 |
| CDY10441 | Canola | cytosol, extracellular, mitochondrion, plastid | 20.36 | 57.66 |
| CDY55418 | Canola | cytosol | 44.07 | 57.19 |
| HORVU4Hr1G018230.1 | Barley | plastid | 47.42 | 47.42 |
| HORVU4Hr1G086380.1 | Barley | mitochondrion, plastid | 41.24 | 46.24 |
| HORVU7Hr1G011180.12 | Barley | plastid | 39.95 | 43.18 |
| HORVU1Hr1G044680.1 | Barley | plastid | 25.52 | 25.06 |
| HORVU2Hr1G119050.2 | Barley | mitochondrion | 21.13 | 21.87 |
| HORVU2Hr1G020490.1 | Barley | plastid | 9.02 | 21.6 |
| HORVU4Hr1G073090.1 | Barley | plastid | 7.73 | 21.43 |
| HORVU2Hr1G006120.3 | Barley | plastid | 6.44 | 20.49 |
| HORVU5Hr1G104070.1 | Barley | plastid | 6.44 | 19.53 |
| HORVU2Hr1G119090.2 | Barley | plastid | 6.96 | 6.38 |
Protein Annotations
| EnsemblPlants:HORVU5Hr1G075530.8 | EnsemblPlantsGene:HORVU5Hr1G075530 | Gene3D:3.40.50.720 | InterPro:NAD(P)-bd_dom_sf | InterPro:SDR_fam | PANTHER:PTHR24320 |
| PANTHER:PTHR24320:SF81 | PFAM:PF00106 | PRINTS:PR00080 | PRINTS:PR00081 | SEG:seg | SUPFAM:SSF51735 |
| TMHMM:TMhelix | UniParc:UPI000B472406 | UniProt:A0A287RUB7 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chrchr5H:+:547367449..547371640
Molecular Weight (calculated)
42236.7 Da
IEP (calculated)
7.327
GRAVY (calculated)
-0.011
Length
388 amino acids
Sequence
(BLAST)
(BLAST)
001: MRLDDAQNDA HRPPLVLGGS NFVFVSLFCY SSVFDLFQAY AVKCACRICY SYHITSLLVL GAENHQMGLL SLITGRPGAS GFGSASTAEQ VTDGVDASNL
101: TVIITGGPSG IGLETSRVFA LRGANVIIAA RNTEAASEAK KSITEANPTA RVDVLKLDLS SLKSVRAFAE QFNSMNLPLN ILINNAGVMF CPFQLSEDGV
201: EMQFATNHLG HFLLTNLLLD NMKATAESTG IEGRIVNLSS IAHEHTYPKG IQFDKLNDKK TFDRRSAYGQ SKLANILHAK ELSRRLKEEG ANITVNSLHP
301: GVIMTNLMRH SYAVMKAIQL ATCLIWKNVP QGAATTCYVG LSHELKGVTG KYFADCNEEK TSELAKSDIL AKQLWEFSEE LVKSAHQI
101: TVIITGGPSG IGLETSRVFA LRGANVIIAA RNTEAASEAK KSITEANPTA RVDVLKLDLS SLKSVRAFAE QFNSMNLPLN ILINNAGVMF CPFQLSEDGV
201: EMQFATNHLG HFLLTNLLLD NMKATAESTG IEGRIVNLSS IAHEHTYPKG IQFDKLNDKK TFDRRSAYGQ SKLANILHAK ELSRRLKEEG ANITVNSLHP
301: GVIMTNLMRH SYAVMKAIQL ATCLIWKNVP QGAATTCYVG LSHELKGVTG KYFADCNEEK TSELAKSDIL AKQLWEFSEE LVKSAHQI
001: MGIYGVMTGK KGKSGFGSAS TAEDVTQAID ASHLTAIITG GTSGIGLEAA RVLAMRGAHV IIAARNPKAA NESKEMILQM NPNARVDYLQ IDVSSIKSVR
101: SFVDQFLALN VPLNILINNA GVMFCPFKLT EDGIESQFAT NHIGHFLLTN LLLDKMKSTA RESGVQGRIV NLSSIAHTYT YSEGIKFQGI NDPAGYSERR
201: AYGQSKLSNL LHSNALSRRL QEEGVNITIN SVHPGLVTTN LFRYSGFSMK VFRAMTFLFW KNIPQGAATT CYVALHPDLE GVTGKYFGDC NIVAPSKFAT
301: NNSLADKLWD FSVFLIDSIS K
101: SFVDQFLALN VPLNILINNA GVMFCPFKLT EDGIESQFAT NHIGHFLLTN LLLDKMKSTA RESGVQGRIV NLSSIAHTYT YSEGIKFQGI NDPAGYSERR
201: AYGQSKLSNL LHSNALSRRL QEEGVNITIN SVHPGLVTTN LFRYSGFSMK VFRAMTFLFW KNIPQGAATT CYVALHPDLE GVTGKYFGDC NIVAPSKFAT
301: NNSLADKLWD FSVFLIDSIS K
Arabidopsis Description
NAD(P)-binding Rossmann-fold superfamily protein [Source:UniProtKB/TrEMBL;Acc:O80924]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.