Factsheet for HORVU2Hr1G119050.2

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

cytosol 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
Predotar:	mitochondrion
TargetP:	mitochondrion

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU1Hr1G044680.1
HORVU1Hr1G076010.1
HORVU2Hr1G006120.3
HORVU2Hr1G020490.1
HORVU2Hr1G084420.1
HORVU2Hr1G091830.4
HORVU2Hr1G119050.2
HORVU2Hr1G119090.2
HORVU3Hr1G026980.2
HORVU3Hr1G071060.1
HORVU4Hr1G073090.1
HORVU5Hr1G025740.13
HORVU5Hr1G104070.1
HORVU6Hr1G060760.3
HORVU7Hr1G071270.2
HORVU7Hr1G088900.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G03630.1	HORVU1Hr1G044680.1	AT1G03630.1	21798944
AT1G03630.1	HORVU2Hr1G006120.3	AT1G03630.1	21798944
AT1G03630.1	HORVU2Hr1G020490.1	AT1G03630.1	21798944
AT1G03630.1	HORVU2Hr1G119050.2	AT1G03630.1	21798944
AT1G03630.1	HORVU2Hr1G119090.2	AT1G03630.1	21798944
AT1G03630.1	HORVU4Hr1G073090.1	AT1G03630.1	21798944
AT1G03630.1	HORVU5Hr1G104070.1	AT1G03630.1	21798944
AT1G03630.1	HORVU2Hr1G084420.1	AT1G27300.1	21798944
AT1G03630.1	HORVU1Hr1G076010.1	AT3G16310.1	21798944
AT1G03630.1	HORVU3Hr1G026980.2	AT3G16310.1	21798944
AT1G03630.1	HORVU3Hr1G071060.1	AT3G16310.1	21798944
AT1G03630.1	HORVU2Hr1G091830.4	AT3G60600.1	21798944
AT1G03630.1	HORVU6Hr1G060760.3	AT3G60600.1	21798944
AT1G03630.1	HORVU7Hr1G071270.2	AT3G60600.1	21798944
AT1G03630.1	HORVU7Hr1G088900.1	AT4G19030.1	21798944
AT1G03630.1	HORVU1Hr1G044680.1	AT4G27440.1	21798944
AT1G03630.1	HORVU2Hr1G006120.3	AT4G27440.1	21798944
AT1G03630.1	HORVU2Hr1G020490.1	AT4G27440.1	21798944
AT1G03630.1	HORVU2Hr1G119050.2	AT4G27440.1	21798944
AT1G03630.1	HORVU2Hr1G119090.2	AT4G27440.1	21798944
AT1G03630.1	HORVU4Hr1G073090.1	AT4G27440.1	21798944
AT1G03630.1	HORVU5Hr1G104070.1	AT4G27440.1	21798944
AT1G03630.1	HORVU5Hr1G025740.13	AT5G11980.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU2Hr1G006120.3	Barley	plastid	29.6	90.98
HORVU4Hr1G073090.1	Barley	plastid	30.4	81.43
HORVU5Hr1G104070.1	Barley	plastid	27.2	79.69
TraesCS2A01G590600.1	Wheat	plastid	73.6	71.13
TraesCS2B01G593000.1	Wheat	plastid	73.6	71.13
TraesCS2D01G563600.1	Wheat	golgi, plastid	73.6	71.13
HORVU2Hr1G020490.1	Barley	plastid	29.87	69.14
Os04t0678700-01	Rice	plastid	62.67	60.72
TraesCS2D01G563700.1	Wheat	cytosol	38.93	60.58
Zm00001d001820_P001	Maize	plastid	62.4	60.47
EES11656	Sorghum	plastid	61.6	60.0
GSMUA_Achr3P14270_001	Banana	plastid	57.33	55.56
KRH26074	Soybean	plastid	50.67	55.56
Bra026349.1-P	Field mustard	plastid	56.0	54.12
KRH27209	Soybean	nucleus, plastid	56.53	53.13
GSMUA_Achr7P04280_001	Banana	plastid	56.27	53.02
CDX89249	Canola	plastid	56.0	52.9
CDY29311	Canola	plastid	56.0	52.9
Bra019049.1-P	Field mustard	plastid	55.73	52.51
KRH55334	Soybean	plastid	55.73	52.38
Solyc10g006900.2.1	Tomato	plastid	54.93	52.15
PGSC0003DMT400039734	Potato	plastid	54.93	51.89
Solyc12g013710.1.1	Tomato	extracellular, nucleus, plastid	54.93	51.89
HORVU1Hr1G044680.1	Barley	plastid	54.4	51.65
Bra003004.1-P	Field mustard	plastid	55.47	51.61
VIT_19s0014g03160.t01	Wine grape	plastid	54.13	51.26
PGSC0003DMT400064369	Potato	plastid	54.4	51.26
CDY14325	Canola	plastid	55.2	51.24
AT5G54190.1	Thale cress	plastid	55.2	51.11
VIT_12s0059g00270.t01	Wine grape	plastid	54.13	50.88
AT4G27440.1	Thale cress	plastid	54.4	50.87
CDX89877	Canola	plastid	53.87	50.5
CDY18175	Canola	plastid	53.87	50.5
CDY15470	Canola	plastid	53.33	50.25
Bra033415.1-P	Field mustard	plastid	53.6	50.25
Bra030540.1-P	Field mustard	plastid	53.07	50.0
CDY51384	Canola	plastid	53.07	50.0
AT1G03630.1	Thale cress	plastid	53.33	49.88
PGSC0003DMT400047264	Potato	plastid	52.27	49.25
Solyc07g054210.2.1	Tomato	plastid	52.0	48.87
CDY18309	Canola	plastid	43.2	46.42
CDX98171	Canola	plastid	43.2	46.42
CDY29840	Canola	plastid	55.2	32.7
CDX92832	Canola	plastid	55.47	32.65
HORVU3Hr1G013970.6	Barley	plastid	20.53	21.69
HORVU5Hr1G075530.8	Barley	cytosol, nucleus, plastid	21.87	21.13
HORVU4Hr1G086380.1	Barley	mitochondrion, plastid	18.93	20.52
HORVU4Hr1G018230.1	Barley	plastid	20.27	19.59
HORVU7Hr1G011180.12	Barley	plastid	18.67	19.5
HORVU2Hr1G119090.2	Barley	plastid	5.6	4.96

Protein Annotations

KEGG:00860+1.3.1.33	Gene3D:3.40.50.720	MapMan:7.12.6.5.1	UniProt:A0A287JN07	ncoils:Coil	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009507	GO:GO:0009536	GO:GO:0009987	GO:GO:0015979
GO:GO:0015995	GO:GO:0016491	GO:GO:0016630	GO:GO:0055114	EnsemblPlantsGene:HORVU2Hr1G119050	EnsemblPlants:HORVU2Hr1G119050.2
InterPro:NAD(P)-bd_dom_sf	PFAM:PF00106	PRINTS:PR00081	PANTHER:PTHR44419	PANTHER:PTHR44419:SF2	InterPro:Prochl_reduct
InterPro:SDR_fam	SUPFAM:SSF51735	TIGRFAMs:TIGR01289	UniParc:UPI000B475EB4	SEG:seg	:

Description

NADPH-protochlorophyllide oxidoreductase [Source:UniProtKB/TrEMBL;Acc:A0A287JN07]

Coordinates

chrchr2H:-:744120806..744122135

Molecular Weight (calculated)

32763.4 Da

IEP (calculated)

9.622

GRAVY (calculated)

-0.107

Length

375 amino acids

Sequence
(BLAST)

001: MVDRIRCRYG RPFGYQXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX KDTAAFLGVS SKAKKASLAV RTQVATAPSP VTTSPGSTAS SPSGKKTLRQ
101: GVVVITGASS GLGLAAAKAL AETGKWHVVM ACRDFLKASK AAKAAGMADG SYTVMHLDLA SLDSVRQFVD AFRRAEMPLD VLVCNAAIYR PTARTPTFTA
201: DGHEMSVGVN HLGHFLLARL LMEDLQKSDY PSRRMVIVGS ITGNSNTLAG NVPPKASLGD LRGLAGGLSG ASGSAMIDGD ESFDGAKAYK DSKVCNMLTM
301: QEFHRRYHEE TGITFSSLYP GCIATXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXE KCFKLIDPEI EKHYK

Best Arabidopsis Sequence Match ( AT1G03630.1 )
(BLAST)

001: MALQAAYSLL PSTISIQKEG KFNASLKETT FTGSSFSNHL RAEKISTLLT IKEQRRQKPR FSTGIRAQTV TATPPANEAS PEQKKTERKG TAVITGASSG
101: LGLATAKALA DTGKWHVIMA CRNFLKAEKA ARSVGMSKED YTVMHLDLAS LESVKQFVEN FRRTEQPLDV LVCNAAVYQP TAKEPSFTAE GFEISVGTNH
201: LGHFLLSRLL LDDLKKSDYP SKRMIIVGSI TGNTNTLAGN VPPKANLGDL RGLASGLNGQ NSSMIDGGEF DGAKAYKDSK VCNMLTMQEL HRRYHEETGV
301: TFASLYPGCI ATTGLFREHI PLFRLLFPPF QKYITKGYVS EEEAGKRLAQ VVSDPSLGKS GVYWSWNNNS SSFENQLSKE ASDAEKAKKL WEVSEKLVGL
401: A

Arabidopsis Description

PORCProtochlorophyllide reductase C, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O48741]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.