Factsheet for Bra003004.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 11

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY14325	Canola	plastid	99.26	99.01
AT5G54190.1	Thale cress	plastid	93.05	92.59
Bra026349.1-P	Field mustard	plastid	84.86	88.14
Bra019049.1-P	Field mustard	plastid	84.86	85.93
Solyc12g013710.1.1	Tomato	extracellular, nucleus, plastid	82.38	83.63
KRH27209	Soybean	nucleus, plastid	82.13	82.96
PGSC0003DMT400039734	Potato	plastid	81.64	82.87
VIT_19s0014g03160.t01	Wine grape	plastid	80.89	82.32
Solyc10g006900.2.1	Tomato	plastid	79.9	81.52
PGSC0003DMT400064369	Potato	plastid	80.4	81.41
TraesCS2D01G563700.1	Wheat	cytosol	47.89	80.08
KRH55334	Soybean	plastid	78.41	79.2
VIT_12s0059g00270.t01	Wine grape	plastid	77.67	78.45
PGSC0003DMT400047264	Potato	plastid	76.67	77.64
Solyc07g054210.2.1	Tomato	plastid	76.67	77.44
EER94008	Sorghum	plastid	75.19	76.9
KRH26074	Soybean	plastid	65.26	76.9
Zm00001d013937_P001	Maize	plastid	75.43	76.77
Bra033415.1-P	Field mustard	plastid	76.18	76.75
GSMUA_Achr3P14270_001	Banana	plastid	73.45	76.49
Bra030540.1-P	Field mustard	plastid	75.43	76.38
GSMUA_Achr11P...	Banana	plastid	74.94	76.26
Zm00001d032576_P001	Maize	plastid	74.94	76.26
TraesCS1B01G186300.1	Wheat	plastid	74.44	75.95
HORVU1Hr1G044680.1	Barley	plastid	74.19	75.7
Os04t0678700-01	Rice	plastid	71.46	74.42
Os10t0496900-02	Rice	plastid	73.95	74.13
TraesCS2A01G590600.1	Wheat	plastid	70.97	73.71
TraesCS2B01G593000.1	Wheat	plastid	70.72	73.45
TraesCS2D01G563600.1	Wheat	golgi, plastid	70.72	73.45
EES11656	Sorghum	plastid	69.48	72.73
GSMUA_Achr7P04280_001	Banana	plastid	71.46	72.36
TraesCS1A01G171000.1	Wheat	golgi, plastid	74.44	71.94
TraesCS1D01G168700.2	Wheat	plastid	74.19	71.7
Zm00001d001820_P001	Maize	plastid	68.49	71.32
HORVU2Hr1G006120.3	Barley	plastid	16.87	55.74
HORVU4Hr1G073090.1	Barley	plastid	19.35	55.71
HORVU2Hr1G119050.2	Barley	mitochondrion	51.61	55.47
HORVU5Hr1G104070.1	Barley	plastid	16.87	53.12
HORVU2Hr1G020490.1	Barley	plastid	21.09	52.47
Bra020819.1-P	Field mustard	cytosol, plastid	25.56	31.99
Bra035220.1-P	Field mustard	cytosol	25.06	31.86
Bra005188.1-P	Field mustard	cytosol	24.81	31.55
Bra013690.1-P	Field mustard	plastid	25.31	31.48
Bra017180.1-P	Field mustard	cytosol	25.06	31.46
Bra009580.1-P	Field mustard	mitochondrion	23.82	29.0
Bra005729.1-P	Field mustard	mitochondrion	23.57	28.7
Bra013757.1-P	Field mustard	cytosol	22.83	27.71
Bra019248.1-P	Field mustard	cytosol	22.58	27.41
Bra027706.1-P	Field mustard	plastid	23.08	26.88
Bra027725.1-P	Field mustard	plastid	23.33	26.55
Bra026308.1-P	Field mustard	cytosol, nucleus, peroxisome	22.08	23.86
Bra029096.1-P	Field mustard	nucleus	21.34	22.75
HORVU2Hr1G119090.2	Barley	plastid	22.83	21.75
Bra019028.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	21.59	21.43
Bra022628.1-P	Field mustard	cytosol, mitochondrion	20.84	20.95
Bra037939.1-P	Field mustard	cytosol	22.08	17.91
Bra027724.1-P	Field mustard	cytosol, plastid	0.0	0.0

Protein Annotations

KEGG:00860+1.3.1.33	Gene3D:3.40.50.720	MapMan:7.12.6.5.1	EnsemblPlantsGene:Bra003004	EnsemblPlants:Bra003004.1	EnsemblPlants:Bra003004.1-P
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009507	GO:GO:0009534
GO:GO:0009536	GO:GO:0009579	GO:GO:0009628	GO:GO:0009640	GO:GO:0009647	GO:GO:0009719
GO:GO:0009723	GO:GO:0009791	GO:GO:0009941	GO:GO:0009987	GO:GO:0015979	GO:GO:0015995
GO:GO:0016491	GO:GO:0016630	GO:GO:0055114	UniProt:M4CFM2	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00106
PRINTS:PR00081	PANTHER:PTHR44419	PANTHER:PTHR44419:SF2	InterPro:Prochl_reduct	InterPro:SDR_fam	SUPFAM:SSF51735
TIGRFAMs:TIGR01289	UniParc:UPI0002543EB1	SEG:seg	:	:	:

Description

AT5G54190 (E=4e-201) PORA | PORA; oxidoreductase/ protochlorophyllide reductase

Coordinates

chrA10:-:6122664..6124482

Molecular Weight (calculated)

43855.3 Da

IEP (calculated)

10.068

GRAVY (calculated)

-0.213

Length

403 amino acids

Sequence
(BLAST)

001: MALQAASLVS SAFSVRKDGK SNASSSFKES SLFGASLSDQ IKSDFVSFSL RCKREQSLRT TGARIRAQTI VTSTPSVTRS TFDRKKTLRK GNVVVTGASS
101: GLGLATAKAL AETGKWHVIM ACRDFLKAER AAKSAGMPKD SYTVMHLDLA SLDSVRQFVD NFRRAEMPLD VLVCNAAIYQ PTANKPTFTA EGFELSVGTN
201: HLGHFLLSRL LIDDLKNSDY PSKRLIIVGS ITGNTNTLAG NVPPKANLGD LRGLASGLNG LNSSAMIDGG DFNGAKAYKD SKVCNMLTMQ EFHRRFHEET
301: GITFASLYPG CIATTGLFRE HIPLFRSLFP LFQKYITKGY VSEAEAGKRL AQVVGDPNLT KSGVYWSWNK TSASFENQLS QEASDVEKAR RVWEVSEKLV
401: GSA

Best Arabidopsis Sequence Match ( AT5G54190.1 )
(BLAST)

001: MALQAASLVS SAFSVRKDGK LNASASSSFK ESSLFGVSLS EQSKADFVSS SLRCKREQSL RNNKAIIRAQ AIATSTPSVT KSSLDRKKTL RKGNVVVTGA
101: SSGLGLATAK ALAETGKWHV IMACRDFLKA ERAAQSAGMP KDSYTVMHLD LASLDSVRQF VDNFRRAEMP LDVLVCNAAV YQPTANQPTF TAEGFELSVG
201: INHLGHFLLS RLLIDDLKNS DYPSKRLIIV GSITGNTNTL AGNVPPKANL GDLRGLAGGL NGLNSSAMID GGDFVGAKAY KDSKVCNMLT MQEFHRRFHE
301: DTGITFASLY PGCIATTGLF REHIPLFRTL FPPFQKYITK GYVSESEAGK RLAQVVADPS LTKSGVYWSW NKTSASFENQ LSQEASDVEK ARRVWEVSEK
401: LVGLA

Arabidopsis Description

PORAPORA [Source:UniProtKB/TrEMBL;Acc:A0A178UR02]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.