Factsheet for Bra022628.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

nucleus 1
mitochondrion 4
plastid 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Plant-mPloc:	plastid
Predotar:	secretory
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY27027	Canola	golgi, mitochondrion, nucleus	99.0	88.62
CDX96191	Canola	mitochondrion	92.27	84.09
AT5G53090.1	Thale cress	cytosol	76.06	81.33
Bra026308.1-P	Field mustard	cytosol, nucleus, peroxisome	67.33	72.39
VIT_17s0000g00520.t01	Wine grape	cytosol, mitochondrion, peroxisome	65.09	70.35
Bra029096.1-P	Field mustard	nucleus	63.59	67.46
Bra019028.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	66.58	65.76
PGSC0003DMT400026316	Potato	cytosol	62.34	64.94
KRH09442	Soybean	cytosol	60.85	64.72
Solyc03g098460.2.1	Tomato	cytosol	62.09	64.68
KRH38907	Soybean	endoplasmic reticulum	60.85	64.55
GSMUA_Achr7P04190_001	Banana	cytosol	58.6	57.32
Os02t0116500-01	Rice	cytosol	56.86	57.0
TraesCS6A01G045200.1	Wheat	cytosol	55.36	54.68
Zm00001d054039_P001	Maize	cytosol	56.61	54.57
TraesCS6D01G051500.1	Wheat	cytosol	55.61	54.52
TraesCS6B01G060600.1	Wheat	cytosol	55.36	54.01
EES04360	Sorghum	cytosol	56.61	53.66
Zm00001d014994_P001	Maize	cytosol	54.36	45.8
Bra020819.1-P	Field mustard	cytosol, plastid	25.94	32.3
Bra013690.1-P	Field mustard	plastid	25.19	31.17
Bra017180.1-P	Field mustard	cytosol	24.19	30.22
Bra005188.1-P	Field mustard	cytosol	23.44	29.65
Bra019248.1-P	Field mustard	cytosol	23.44	28.31
Bra013757.1-P	Field mustard	cytosol	23.19	28.01
Bra035220.1-P	Field mustard	cytosol	21.95	27.76
Bra009580.1-P	Field mustard	mitochondrion	22.19	26.89
Bra027706.1-P	Field mustard	plastid	22.94	26.59
Bra027725.1-P	Field mustard	plastid	23.44	26.55
Bra005729.1-P	Field mustard	mitochondrion	21.45	25.98
Bra026349.1-P	Field mustard	plastid	20.7	21.39
Bra019049.1-P	Field mustard	plastid	21.2	21.36
Bra003004.1-P	Field mustard	plastid	20.95	20.84
Bra033415.1-P	Field mustard	plastid	20.7	20.75
Bra030540.1-P	Field mustard	plastid	20.45	20.6
Bra037939.1-P	Field mustard	cytosol	22.19	17.91
Bra027724.1-P	Field mustard	cytosol, plastid	0.0	0.0

Protein Annotations

EnsemblPlants:Bra022628.1	EnsemblPlants:Bra022628.1-P	EnsemblPlantsGene:Bra022628	Gene3D:3.40.50.720	InterPro:NAD(P)-bd_dom_sf	InterPro:SDR_fam
PANTHER:PTHR24320	PANTHER:PTHR24320:SF73	PFAM:PF00106	PRINTS:PR00080	PRINTS:PR00081	SEG:seg
SUPFAM:SSF51735	UniParc:UPI0002546DE6	UniProt:M4E1H9	MapMan:35.1	:	:

Description

AT5G53090 (E=6e-160) | binding / catalytic/ oxidoreductase

Coordinates

chrA02:-:8426679..8430328

Molecular Weight (calculated)

44700.1 Da

IEP (calculated)

7.153

GRAVY (calculated)

0.014

Length

401 amino acids

Sequence
(BLAST)

001: MEWIRGWACV FHEFLFQRFM SSHLPNPLSL PPLSHLTCIV TGSTSGIGRE TARQLAEAGA HVVMAVRNTK AAHDLIQQWQ RDWSAKGLPL NIEAMELDLL
101: SLDSVVNFSI AWNARLAPLH VLINNAGIFA MGEEQKFSKD GYEQHMQVNH LAPALLSLLL LPSLNRASPS RIINVNSVMH YVGFVDPDDM NVVSGRRKFT
201: SLVGYSGSKL AQVMFSNVLF KRLPLESRIS VVCLSPGIVL TNVARDLPRS VQVQYALIPY FIFSPQEGCR SSLFSATDAQ IPEHCEKLKT GDKPICTFIS
301: QDCKHTKPSE EAQNVETANR VWEKTVELIG LPLDALERLL QGQELAEAGA HVVMAVRNMK AANELIQQWR TKWSASVGTM YDDFVLQSNG IWIAMLSAYC
401: H

Best Arabidopsis Sequence Match ( AT5G53090.1 )
(BLAST)

001: MSSETSSLTK KMKKKKEGLG WIESIKGWSC VFHEFLFQRF MASHLQNPLP LPSLNHLTCI VTGSTSGIGR ETARQLAEAG ARVVMAVRNT KAAHELIQQW
101: QKEWSGKGIP LNLEAMELDL LSLDSVVGFC NLWNARLSPL HVLINNAGIF SMGEEQKFSK DGYEQHMQVN HLAPALLSLL LLPSLIRGSP SRIINVNSVM
201: HYVGFVDPDD MNVVSGKRKF TSLVGYSGSK LAQVMFSNVL LKRLPLETRI SVVCLSPGIV LTNVARDLPR YVQVQYALIP YFIFSPQEGS RSTLFSATDA
301: QIPEHCEKLK TEDKPVCTFI SQNCKHTKPS EEAHNVETAE RVWEKTIKLI GLPLDAVERL IEGEEVQCRY GTHQQ

Arabidopsis Description

At5g53090 [Source:UniProtKB/TrEMBL;Acc:Q66GR1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.