Factsheet for Bra027725.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
cytosol 1
plastid 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra027706.1-P	Field mustard	plastid	91.53	93.64
AT1G64590.1	Thale cress	plastid	85.31	90.42
Bra019248.1-P	Field mustard	cytosol	68.93	73.49
KRH41377	Soybean	cytosol	68.36	71.81
PGSC0003DMT400031933	Potato	cytosol	68.36	71.81
Solyc08g082870.2.1	Tomato	cytosol	68.36	71.81
VIT_02s0025g02190.t01	Wine grape	cytosol	67.8	71.43
Bra013757.1-P	Field mustard	cytosol	66.38	70.78
GSMUA_Achr8P11870_001	Banana	cytosol	64.97	67.65
TraesCS5A01G527400.1	Wheat	mitochondrion	61.58	65.47
TraesCS4D01G351800.1	Wheat	mitochondrion	61.58	65.27
TraesCS4B01G358400.1	Wheat	mitochondrion	61.3	65.17
GSMUA_Achr11P...	Banana	cytosol	62.71	64.35
TraesCS4B01G358200.1	Wheat	mitochondrion, plastid	60.45	64.26
Os03t0115700-01	Rice	mitochondrion	60.17	64.16
TraesCS5A01G527300.1	Wheat	mitochondrion	61.58	64.12
TraesCS4B01G358500.1	Wheat	mitochondrion	61.58	63.37
HORVU4Hr1G086380.1	Barley	mitochondrion, plastid	61.58	63.01
Os06t0129100-01	Rice	mitochondrion	61.3	61.47
TraesCS4D01G351700.1	Wheat	mitochondrion, plastid	61.02	61.36
Zm00001d045495_P001	Maize	mitochondrion	62.15	60.94
EER87765	Sorghum	mitochondrion	61.3	60.28
TraesCS4B01G358300.1	Wheat	plastid	52.82	59.94
OQU93381	Sorghum	mitochondrion	59.89	59.72
TraesCS7A01G061000.1	Wheat	mitochondrion, plastid	59.04	58.87
HORVU7Hr1G011180.12	Barley	plastid	59.32	58.5
Zm00001d027353_P001	Maize	mitochondrion	59.6	58.45
TraesCS7D01G055800.1	Wheat	mitochondrion, plastid	59.04	57.73
TraesCS4A01G428800.1	Wheat	mitochondrion, plastid	58.19	57.38
Bra017180.1-P	Field mustard	cytosol	44.92	49.53
Bra005188.1-P	Field mustard	cytosol	42.94	47.95
Bra009580.1-P	Field mustard	mitochondrion	44.63	47.73
Bra005729.1-P	Field mustard	mitochondrion	43.5	46.53
Bra020819.1-P	Field mustard	cytosol, plastid	40.4	44.41
Bra035220.1-P	Field mustard	cytosol	39.27	43.85
Bra013690.1-P	Field mustard	plastid	39.55	43.21
CDY47833	Canola	cytosol, nucleus, plastid	96.33	38.27
Bra037939.1-P	Field mustard	cytosol	46.89	33.4
Bra026308.1-P	Field mustard	cytosol, nucleus, peroxisome	29.94	28.42
Bra029096.1-P	Field mustard	nucleus	27.68	25.93
Bra019028.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	28.25	24.63
Bra033415.1-P	Field mustard	plastid	27.68	24.5
Bra019049.1-P	Field mustard	plastid	27.4	24.37
Bra030540.1-P	Field mustard	plastid	27.12	24.12
Bra026349.1-P	Field mustard	plastid	25.99	23.71
Bra022628.1-P	Field mustard	cytosol, mitochondrion	26.55	23.44
Bra003004.1-P	Field mustard	plastid	26.55	23.33
Bra027724.1-P	Field mustard	cytosol, plastid	2.54	1.65

Protein Annotations

EnsemblPlants:Bra027725.1	EnsemblPlants:Bra027725.1-P	EnsemblPlantsGene:Bra027725	Gene3D:3.40.50.720	InterPro:NAD(P)-bd_dom_sf	InterPro:SDR_fam
PANTHER:PTHR24320	PANTHER:PTHR24320:SF114	PFAM:PF00106	PRINTS:PR00081	SEG:seg	SUPFAM:SSF51735
UniParc:UPI00025422F7	UniProt:M4EG12	MapMan:35.1	:	:	:

Description

AT1G64590 (E=9e-159) | short-chain dehydrogenase/reductase (SDR) family protein

Coordinates

chrA09:+:6624232..6625940

Molecular Weight (calculated)

38793.6 Da

IEP (calculated)

8.833

GRAVY (calculated)

-0.023

Length

354 amino acids

Sequence
(BLAST)

001: MIETVKHLVG SGGPSGFGSR STAEHVTANC DLRSLTAIIT GATSGIGAET ARVLAKRGAR LVIPARSLKT AEETKSRILS EFPDAEIIVM HLDLSSLASV
101: RRFVDDFESL HLPLNILINN AGKYAQKHAI SEDGVEMTFA TNYLGHFLLT KLLLKNMIET AEQTGVQGRI VNVTSVIHSW FSGDMLQYVA DISRNNRNYD
201: ATRAYALSKL ANVLHTIELS RILHKMDANV TANCVHPGIV RTRLTRDRDG LITDLVFFLT SKLLKSVPQA AATTCYVATS PRLRNVCGKY FSDCNEARTS
301: KSGSCNLKAQ RLWTASELLV APASTPNVYQ TFNYFLANDA SMCKSQDLDS FTII

Best Arabidopsis Sequence Match ( AT1G64590.1 )
(BLAST)

001: MIETVKHLIG SGGPSGFGSR STADHVTCNS DLRSLTAIIT GATSGIGAET ARVLAKRGAR LVLPARSVKT AEETKARILS EFPDAEIIVM HLDLSSLTSV
101: RRFVDDFESL NLPLNILINN AGKYAHKHAL SEDGVEMTFA TNYLGHFLLT KLLLKKMIET AAQTGVQGRI VNVTSVVHSW FSGDMLQYLA DISRNNRNYD
201: ATRAYALSKL ANVLHTVELS RLLHKMDANV TANCVHPGIV KTRLTRDREG VVTDLVFFLT SKLLKSVPQA AATTCYVATS PRLRNVCGKY FSDCNEARSS
301: KSGSCNLKAQ RLWTASDLLV SPPNSTTNLS HTSF

Arabidopsis Description

At1g64590/F1N19_15 [Source:UniProtKB/TrEMBL;Acc:Q9SGV6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.