Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid
Predictor Summary:
Predictor Summary:
- mitochondrion 4
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G428800.1 | Wheat | mitochondrion, plastid | 95.21 | 94.15 |
| HORVU7Hr1G011180.12 | Barley | plastid | 94.65 | 93.59 |
| EER87765 | Sorghum | mitochondrion | 77.18 | 76.11 |
| Os06t0129100-01 | Rice | mitochondrion | 74.93 | 75.35 |
| Zm00001d045495_P001 | Maize | mitochondrion | 76.06 | 74.79 |
| GSMUA_Achr8P11870_001 | Banana | cytosol | 66.2 | 69.12 |
| TraesCS5A01G527400.1 | Wheat | mitochondrion | 63.1 | 67.27 |
| TraesCS5A01G527300.1 | Wheat | mitochondrion | 63.1 | 65.88 |
| CDY53896 | Canola | plastid | 36.06 | 64.0 |
| VIT_02s0025g02190.t01 | Wine grape | cytosol | 60.56 | 63.99 |
| GSMUA_Achr11P... | Banana | cytosol | 61.97 | 63.77 |
| AT1G64590.1 | Thale cress | plastid | 58.31 | 61.98 |
| AT4G24050.1 | Thale cress | cytosol | 57.75 | 61.75 |
| Bra019248.1-P | Field mustard | cytosol | 57.75 | 61.75 |
| PGSC0003DMT400031933 | Potato | cytosol | 58.59 | 61.72 |
| KRH41377 | Soybean | cytosol | 58.59 | 61.72 |
| Solyc08g082870.2.1 | Tomato | cytosol | 58.03 | 61.13 |
| Bra027706.1-P | Field mustard | plastid | 59.15 | 60.69 |
| CDY10985 | Canola | cytosol | 56.62 | 60.54 |
| Bra013757.1-P | Field mustard | cytosol | 56.34 | 60.24 |
| CDY53433 | Canola | plastid | 58.87 | 60.06 |
| CDX76323 | Canola | cytosol | 56.06 | 59.94 |
| CDY72311 | Canola | cytosol | 34.08 | 59.9 |
| CDY72089 | Canola | cytosol | 33.52 | 59.2 |
| Bra027725.1-P | Field mustard | plastid | 58.87 | 59.04 |
| CDY50440 | Canola | mitochondrion | 56.06 | 58.7 |
| TraesCS4A01G492800.1 | Wheat | mitochondrion, plastid | 15.49 | 47.83 |
| TraesCS4A01G311400.1 | Wheat | mitochondrion, plastid | 41.41 | 46.52 |
| TraesCS5A01G280400.1 | Wheat | plastid | 41.97 | 46.27 |
| TraesCS4A01G218300.1 | Wheat | mitochondrion | 41.97 | 46.13 |
| TraesCS1A01G207500.1 | Wheat | cytosol | 40.0 | 45.08 |
| TraesCS3A01G077400.2 | Wheat | cytosol, plastid | 42.82 | 43.43 |
| TraesCS6A01G045200.1 | Wheat | cytosol | 27.61 | 24.14 |
| CDY47833 | Canola | cytosol, nucleus, plastid | 58.87 | 23.46 |
| CDY08387 | Canola | cytosol, nucleus, plastid | 58.87 | 23.46 |
| TraesCS2A01G590600.1 | Wheat | plastid | 24.79 | 22.68 |
| TraesCS1A01G171000.1 | Wheat | golgi, plastid | 25.07 | 21.34 |
| Bra027724.1-P | Field mustard | cytosol, plastid | 0.56 | 0.37 |
Protein Annotations
| EnsemblPlants:TraesCS7A01G061000.1 | EnsemblPlantsGene:TraesCS7A01G061000 | Gene3D:3.40.50.720 | InterPro:NAD(P)-bd_dom_sf | InterPro:SDR_fam | PANTHER:PTHR24320 |
| PANTHER:PTHR24320:SF147 | PFAM:PF00106 | PRINTS:PR00081 | SEG:seg | SUPFAM:SSF51735 | MapMan:35.1 |
Description
No Description!
Coordinates
chr7A:+:30089604..30091190
Molecular Weight (calculated)
37590.1 Da
IEP (calculated)
9.730
GRAVY (calculated)
0.103
Length
355 amino acids
Sequence
(BLAST)
(BLAST)
001: MLSSLRYLAG SAGPSGYGSR TTAEEATLPA GDLGHITAIV TGATSGIGAE TARVLARRGA RLVLPARNLK AAEETRARIL GDAGSGGDRV VVLPLDLSSL
101: ASVRRFVGRF LALRLPLNLL INNAGQYAER FAVSEDGVEM TFATNYLGHF LLTELLLPAM ADTARATGVQ GRVVNVSSTV HAWFAADDGP LAYLHRVTRK
201: ATPYDPTRAY ALSKLANVLH TAALAGRLRE MGADVTANCV HPGIVRTRLI RDRAGLVTNT VFFLASKLLK TVPQAAATTC YAAVHPAVAG VSGRYFADCN
301: EAAPSRLACS AEEASRLWSF SEGITAEKEK EMSLPVTSFR FQVQSSNADR GMAIA
101: ASVRRFVGRF LALRLPLNLL INNAGQYAER FAVSEDGVEM TFATNYLGHF LLTELLLPAM ADTARATGVQ GRVVNVSSTV HAWFAADDGP LAYLHRVTRK
201: ATPYDPTRAY ALSKLANVLH TAALAGRLRE MGADVTANCV HPGIVRTRLI RDRAGLVTNT VFFLASKLLK TVPQAAATTC YAAVHPAVAG VSGRYFADCN
301: EAAPSRLACS AEEASRLWSF SEGITAEKEK EMSLPVTSFR FQVQSSNADR GMAIA
001: MKGTLRYLAG IAGPNGFGSR STAEQVTQHS FFPCSHLTAI ITGGTSGIGA ETARVLAKRG VRVVMAVRDM KKAEMVKERI IRENPEADII LFEIDLSSLS
101: SVARFCSQFL SQDLPLNILI NNAGVFSPNL EFSEEKIELT FATNFLGHYL LTEMLIEKMI DTAEKSGIEG RIINLSSVIH NWVKPDCFSF PKLLHPISRY
201: NGTRAYAQSK LATILHAKAL SKQLKDRNAN VTINAVHPGI VKTGIIRAHK GLFTDSLFLI ASKLLKSISQ GAATTCYVAL SNETKGLSGK YFADCNETNC
301: SDLANDEYVA LKLCTQSRAL IHDHLHEFQI HALPNLCFL
101: SVARFCSQFL SQDLPLNILI NNAGVFSPNL EFSEEKIELT FATNFLGHYL LTEMLIEKMI DTAEKSGIEG RIINLSSVIH NWVKPDCFSF PKLLHPISRY
201: NGTRAYAQSK LATILHAKAL SKQLKDRNAN VTINAVHPGI VKTGIIRAHK GLFTDSLFLI ASKLLKSISQ GAATTCYVAL SNETKGLSGK YFADCNETNC
301: SDLANDEYVA LKLCTQSRAL IHDHLHEFQI HALPNLCFL
Arabidopsis Description
NAD(P)-binding Rossmann-fold superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8RWK2]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.