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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, plastid

Predictor Summary:
  • plastid 3
  • mitochondrion 5
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion, plastid
Any Predictor:mitochondrion, plastid
ChloroP:plastid
iPSORT:mitochondrion
MultiLoc:mitochondrion
Predotar:mitochondrion
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:plastid
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5B01G461100.1 Wheat mitochondrion, plastid 94.78 94.78
TraesCS3B01G220800.1 Wheat mitochondrion, plastid 93.04 93.04
PGSC0003DMT400085601 Potato plastid 65.22 46.58
TraesCS4A01G311400.1 Wheat mitochondrion, plastid 86.96 31.65
TraesCS4D01G003200.1 Wheat golgi 86.09 31.33
KRH08894 Soybean plastid 57.39 30.41
TraesCS4D01G003400.2 Wheat mitochondrion 82.61 29.5
Os09t0570300-01 Rice plasma membrane 75.65 27.53
EER96376 Sorghum mitochondrion, plastid 70.43 25.63
KRG91557 Soybean cytosol 44.35 24.52
KRH08897 Soybean cytosol, mitochondrion 64.35 23.57
PGSC0003DMT400040845 Potato cytosol 63.48 23.32
GSMUA_AchrUn_... Banana cytosol 63.48 23.32
VIT_16s0050g00760.t01 Wine grape plastid 62.61 23.0
Solyc03g025410.2.1 Tomato nucleus 62.61 23.0
KRG91556 Soybean cytosol 61.74 22.68
PGSC0003DMT400032133 Potato cytosol 61.74 22.54
Solyc03g025400.2.1 Tomato cytosol 61.74 22.47
Solyc03g025390.2.1 Tomato cytosol 60.87 22.36
Solyc08g081200.2.1 Tomato cytosol 60.87 22.22
Zm00001d019754_P001 Maize mitochondrion, plastid 67.83 22.1
PGSC0003DMT400040847 Potato cytosol 60.0 22.04
VIT_02s0025g03380.t01 Wine grape cytosol 59.13 21.59
Bra020819.1-P Field mustard cytosol, plastid 60.0 21.43
CDX76338 Canola cytosol, plastid 60.0 21.43
KRH59919 Soybean cytosol, plastid 58.26 21.27
PGSC0003DMT400040848 Potato plastid 57.39 21.09
KRH38426 Soybean cytosol 59.13 20.86
AT4G11410.1 Thale cress cytosol, mitochondrion 57.39 20.82
CDY10884 Canola plastid 58.26 20.81
Solyc03g025370.2.1 Tomato cytosol, nucleus, plastid 56.52 20.77
KRH38419 Soybean plastid 57.39 20.69
KRH38432 Soybean cytosol 57.39 20.69
AT4G23430.2 Thale cress plastid 57.39 20.5
KRH38431 Soybean plastid 57.39 20.43
KRH38433 Soybean cytosol 56.52 20.38
KRH35271 Soybean plastid 61.74 20.34
KRH41194 Soybean cytosol, plastid 55.65 20.32
KRH08898 Soybean cytosol 55.65 20.25
CDY13264 Canola cytosol 55.65 20.19
CDX86777 Canola cytosol 55.65 20.19
Bra035220.1-P Field mustard cytosol 55.65 20.19
Bra013690.1-P Field mustard plastid 56.52 20.06
TraesCS1A01G207500.1 Wheat cytosol 54.78 20.0
KRH35274 Soybean cytosol, mitochondrion, plastid 60.87 19.5
Solyc08g008060.1.1 Tomato cytosol 52.17 19.05
TraesCS5A01G280400.1 Wheat plastid 52.17 18.63
TraesCS5A01G527300.1 Wheat mitochondrion 54.78 18.53
AT4G23420.3 Thale cress plastid 53.04 18.32
TraesCS5A01G527400.1 Wheat mitochondrion 53.04 18.32
CDY44096 Canola mitochondrion, plastid 57.39 18.28
TraesCS4A01G218300.1 Wheat mitochondrion 51.3 18.27
KRH08895 Soybean cytosol 60.0 18.06
TraesCS3A01G077400.2 Wheat cytosol, plastid 53.91 17.71
CDY69917 Canola endoplasmic reticulum 45.22 17.05
PGSC0003DMT400014810 Potato mitochondrion 33.04 15.51
TraesCS7A01G061000.1 Wheat mitochondrion, plastid 47.83 15.49
TraesCS4A01G428800.1 Wheat mitochondrion, plastid 45.22 14.48
VIT_16s0050g00750.t01 Wine grape plastid 61.74 11.36
TraesCS6A01G045200.1 Wheat cytosol 36.52 10.34
TraesCS2A01G590600.1 Wheat plastid 33.04 9.79
TraesCS1A01G171000.1 Wheat golgi, plastid 30.43 8.39
Protein Annotations
EnsemblPlants:TraesCS4A01G492800.1EnsemblPlantsGene:TraesCS4A01G492800Gene3D:3.40.50.720InterPro:NAD(P)-bd_dom_sfInterPro:SDR_famPANTHER:PTHR24320
PANTHER:PTHR24320:SF146PFAM:PF00106SEG:segSUPFAM:SSF51735MapMan:35.1:
Description
No Description!
Coordinates
chr4A:+:741611366..741611713
Molecular Weight (calculated)
11677.0 Da
IEP (calculated)
5.531
GRAVY (calculated)
0.557
Length
115 amino acids
Sequence
(BLAST)
001: MLPWIFSRKG ASGFSWASTV DHVTAGISAS GLTAIVTGAS SGIGAETARV LAAHGAHVVM VARNLAAAED VRQAVLAESP AASLDLMELD LSSLASVRKF
101: AGDFDATGLP LNILV
Best Arabidopsis Sequence Match ( AT4G23430.4 )
(BLAST)
001: MWFFGSKGAS GFSSRSTAEE VTHGVDGTGL TAIVTGASSG IGVETARVLS LRGVHVVMAV RNTDSGAKVK EDIVKQVPGA KLDVMELDLS SMQSVRKFAS
101: EYKSTGLPLN LLINNAGIMA CPFMLSKDNI ELQFATNHLD TMKSTSRESK REGRIVNLSS EAHRFSYPEG VRFDKINDKS SYSSMRAYGQ SKLCNVLHAN
201: ELTKQLKEDG VNITANSLHP GAIMTNLGRY FNPYLAVAVG AVAKYILKSV PQGAATTCYV ALNPQVAGVS GEYFQDSNIA KPLPLVKDTE LAKKVWDFST
301: KLTDSQSGES SS
Arabidopsis Description
TIC32Short-chain dehydrogenase TIC 32, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:A2RVM0]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.