Factsheet for VIT_16s0050g00750.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

cytosol 2
plastid 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_16s0050g00760.t01	Wine grape	plastid	40.0	79.87
KRG91556	Soybean	cytosol	39.52	78.91
PGSC0003DMT400040845	Potato	cytosol	38.72	77.32
VIT_02s0025g03380.t01	Wine grape	cytosol	38.4	76.19
Solyc03g025410.2.1	Tomato	nucleus	38.08	76.04
KRH38432	Soybean	cytosol	37.92	74.29
KRH08897	Soybean	cytosol, mitochondrion	37.28	74.2
GSMUA_AchrUn_...	Banana	cytosol	36.96	73.8
PGSC0003DMT400040847	Potato	cytosol	36.8	73.48
Solyc03g025390.2.1	Tomato	cytosol	36.64	73.16
KRH08894	Soybean	plastid	25.28	72.81
GSMUA_Achr2P18620_001	Banana	plastid	36.64	72.47
KRH35271	Soybean	plastid	40.16	71.92
Solyc03g025400.2.1	Tomato	cytosol	35.84	70.89
KRH38433	Soybean	cytosol	36.16	70.85
PGSC0003DMT400085601	Potato	plastid	18.24	70.81
KRH08898	Soybean	cytosol	35.68	70.57
EER96376	Sorghum	mitochondrion, plastid	35.36	69.94
KRG91557	Soybean	cytosol	23.04	69.23
Os09t0570300-01	Rice	plasma membrane	34.56	68.35
KRH38426	Soybean	cytosol	35.52	68.1
KRH35274	Soybean	cytosol, mitochondrion, plastid	39.04	67.97
KRH38431	Soybean	plastid	35.04	67.8
TraesCS4D01G003200.1	Wheat	golgi	34.24	67.72
TraesCS4B01G002900.1	Wheat	golgi	34.24	67.72
TraesCS4D01G002700.2	Wheat	mitochondrion, plastid	34.08	67.62
TraesCS4A01G311400.1	Wheat	mitochondrion, plastid	33.92	67.09
TraesCS4B01G003400.1	Wheat	plastid	33.6	66.67
OQU92195	Sorghum	cytosol	33.6	66.67
TraesCS1B01G221200.1	Wheat	cytosol	33.12	65.71
EER91987	Sorghum	plastid	32.8	65.5
Zm00001d047150_P003	Maize	plastid	32.8	65.08
TraesCS4D01G003400.2	Wheat	mitochondrion	33.44	64.91
TraesCS1A01G207500.1	Wheat	cytosol	32.64	64.76
TraesCS1D01G210800.1	Wheat	plastid	32.48	63.84
OQU92191	Sorghum	plastid	31.36	62.62
Os10t0547900-01	Rice	cytosol	31.36	62.42
Os10t0548000-02	Rice	cytosol, peroxisome, plastid	31.84	62.38
Zm00001d019754_P001	Maize	mitochondrion, plastid	35.2	62.32
KRH08895	Soybean	cytosol	38.08	62.3
TraesCS4A01G492800.1	Wheat	mitochondrion, plastid	11.36	61.74
TraesCS5B01G461100.1	Wheat	mitochondrion, plastid	11.36	61.74
Os04t0291100-01	Rice	mitochondrion	30.72	61.15
Zm00001d029840_P003	Maize	plastid	32.48	60.78
TraesCS3B01G220800.1	Wheat	mitochondrion, plastid	11.04	60.0
VIT_08s0040g03400.t01	Wine grape	plastid	29.92	57.72
Zm00001d025129_P001	Maize	mitochondrion	21.44	57.02
VIT_17s0000g08920.t01	Wine grape	cytosol	23.84	45.15
VIT_02s0025g02190.t01	Wine grape	cytosol	23.52	43.75
VIT_17s0000g00520.t01	Wine grape	cytosol, mitochondrion, peroxisome	17.12	28.84
VIT_12s0059g00270.t01	Wine grape	plastid	18.08	28.32
VIT_19s0014g03160.t01	Wine grape	plastid	16.96	26.77

Protein Annotations

EntrezGene:100242214	wikigene:100242214	EntrezGene:100264493	wikigene:100264493	MapMan:23.1.3.5.1	Gene3D:3.40.50.720
EMBL:AM458444	ProteinID:CAN65621	ProteinID:CAN65621.1	ProteinID:CCB47861	ProteinID:CCB47861.1	UniProt:F6H6K5
EMBL:FN595243	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491
GO:GO:0055114	EntrezGene:LOC100242214	wikigene:LOC100242214	EntrezGene:LOC100264493	wikigene:LOC100264493	InterPro:NAD(P)-bd_dom_sf
PFAM:PF00106	PRINTS:PR00080	PRINTS:PR00081	PANTHER:PTHR24320	PANTHER:PTHR24320:SF121	InterPro:SDR_fam
SUPFAM:SSF51735	TIGR:TC51930	TIGR:TC63243	UniParc:UPI0002108153	ArrayExpress:VIT_16s0050g00750	EnsemblPlantsGene:VIT_16s0050g00750
EnsemblPlants:VIT_16s0050g00750.t01	unigene:Vvi.2340	RefSeq:XP_002270039	RefSeq:XP_002270039.1	RefSeq:XP_002270104	RefSeq:XP_002270104.1
RefSeq:XP_003634099	RefSeq:XP_003634099.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr16:+:17678919..17699356

Molecular Weight (calculated)

67532.2 Da

IEP (calculated)

9.882

GRAVY (calculated)

-0.125

Length

625 amino acids

Sequence
(BLAST)

001: MWLFSRKGAS GFSGSSTAEE VTQGIDGTGL TAIVTGASSG IGTETTRVLA LRGVHVVMGV RNMAAGQEVK EAIVKEIPTA KVDVMELDLS SMASVRKFAS
101: EFNSSGLPLN ILINNAGTTG PYMLSKDNIE MLFATNHLGH FLLTSLLLDT MKKTTQESGK EGRIVIVSSE GHRFTYRGGI RFDNINDKSG YSSPFAYGQS
201: KLANVLHANE LARRFKEDGV DITANSLHPG AIVTNIFRHS SILSGLVNTV GKYVLKNVQQ GAATTCYVAL HPQVKGVSGQ YFSDCNIAKP GAQAKDPELA
301: KKLWEFSTGE RRMWWFSRKG PSGFSASSTA EEVTQGIDGT GLTAIVTGAS SGIGTETTRV LALRGVHVVM GVRNMSAGKE VKEAIVKEIP TAKVDAMELD
401: LSSMASVRKF ASEYNSSGLP LNILINNAGI MAVPYMLSKD NIEMQFATNH LGHFLLTNLL LDTMKKTTRK SRKEGRIVNV SSMAHRYPYR EGIRFDKIND
501: KSGYSSLFAY GQSKLANVLH ANELARRFKE DGVDITANSL HPGAIVTNLF RCSSIVSGLV NTVGKLVLKN VQQGAATTCY VALHPQVKGV SGQYFSDCNI
601: AKPSSQAKDP ELAKKLWEFS MNLVK

Best Arabidopsis Sequence Match ( AT4G23420.2 )
(BLAST)

001: MWFFGSKGAS GFSSRSTAEE VTHGVDGTGL TAIVTGASSG IGVETARVLA LRGVHVVMAV RNTGAGAKVK EDIVKQVPGA KVDVMELELS SMESVRKFAS
101: EYKSAGLPLN LLINNAGIMA CPFMLSKDNI ELQFATNHLG HFLLTKLLLD TMKNTSRESK REGRIVNVSS EAHRYSYPEG VRFDKINDES SYSSIRAYGQ
201: SKLCNVLHAN ELAKQLKEDG VNITANSLHP GAIMTNLWGY FNSYLAGAVG AVAKYMVKSV PQGAATTCYV ALNPQVAGVT GEYFSDSNIA KPIELVKDTE
301: LAKKLWDFST KLTDSQ

Arabidopsis Description

NAD(P)-binding Rossmann-fold superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JNJ2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.