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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • cytosol 2
  • plastid 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:cytosol, mitochondrion, plastid
BaCelLo:cytosol
MultiLoc:cytosol
Plant-mPloc:plastid
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:plastid
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d047150_P003 Maize plastid 90.42 89.84
OQU92191 Sorghum plastid 87.86 87.86
OQU92195 Sorghum cytosol 86.9 86.35
TraesCS1B01G221200.1 Wheat cytosol 79.23 78.73
TraesCS1A01G207500.1 Wheat cytosol 78.91 78.41
TraesCS1D01G210800.1 Wheat plastid 78.27 77.04
Os10t0547900-01 Rice cytosol 72.52 72.29
Os10t0548000-02 Rice cytosol, peroxisome, plastid 71.57 70.22
GSMUA_Achr2P18620_001 Banana plastid 65.18 64.56
VIT_16s0050g00760.t01 Wine grape plastid 64.22 64.22
VIT_02s0025g03380.t01 Wine grape cytosol 63.58 63.17
PGSC0003DMT400040848 Potato plastid 62.3 62.3
KRG91556 Soybean cytosol 61.98 61.98
Solyc03g025370.2.1 Tomato cytosol, nucleus, plastid 61.66 61.66
KRH38419 Soybean plastid 62.3 61.13
PGSC0003DMT400032133 Potato cytosol 61.02 60.63
PGSC0003DMT400040845 Potato cytosol 60.38 60.38
Solyc08g081200.2.1 Tomato cytosol 60.7 60.32
Solyc08g008060.1.1 Tomato cytosol 60.7 60.32
KRH41194 Soybean cytosol, plastid 60.38 60.0
PGSC0003DMT400040847 Potato cytosol 59.74 59.74
Solyc03g025390.2.1 Tomato cytosol 59.74 59.74
Solyc03g025410.2.1 Tomato nucleus 59.74 59.74
KRH59919 Soybean cytosol, plastid 60.06 59.68
EER96376 Sorghum mitochondrion, plastid 60.06 59.49
KRH08897 Soybean cytosol, mitochondrion 59.42 59.24
PGSC0003DMT400014810 Potato mitochondrion 46.33 59.18
KRH08898 Soybean cytosol 59.42 58.86
AT4G11410.1 Thale cress cytosol, mitochondrion 59.42 58.68
Bra035220.1-P Field mustard cytosol 59.42 58.68
CDY13264 Canola cytosol 59.42 58.68
CDX86777 Canola cytosol 59.42 58.68
AT4G23430.2 Thale cress plastid 59.42 57.76
PGSC0003DMT400085601 Potato plastid 29.71 57.76
KRH08894 Soybean plastid 39.94 57.6
Solyc03g025400.2.1 Tomato cytosol 57.83 57.28
EES02479 Sorghum cytosol, plastid 57.83 56.56
CDY10884 Canola plastid 58.15 56.52
KRH38432 Soybean cytosol 57.51 56.43
CDX76338 Canola cytosol, plastid 57.83 56.21
Bra020819.1-P Field mustard cytosol, plastid 57.83 56.21
Bra013690.1-P Field mustard plastid 58.15 56.17
KRH38433 Soybean cytosol 57.19 56.11
KRH38426 Soybean cytosol 57.51 55.21
KRH35271 Soybean plastid 61.02 54.73
KRG91557 Soybean cytosol 36.1 54.33
AT4G23420.3 Thale cress plastid 57.51 54.05
CDY69917 Canola endoplasmic reticulum 52.08 53.44
KRH35274 Soybean cytosol, mitochondrion, plastid 61.02 53.2
KRH38431 Soybean plastid 54.31 52.63
CDY44096 Canola mitochondrion, plastid 58.47 50.69
EES08101 Sorghum cytosol 55.27 47.14
KRH08895 Soybean cytosol 57.51 47.12
EER87765 Sorghum mitochondrion 47.28 41.11
OQU93381 Sorghum mitochondrion 46.33 40.85
VIT_16s0050g00750.t01 Wine grape plastid 65.5 32.8
EES11656 Sorghum plastid 31.95 25.97
EER94008 Sorghum plastid 30.67 24.37
EES04360 Sorghum cytosol 31.63 23.4
Protein Annotations
EnsemblPlants:EER91987EnsemblPlantsGene:SORBI_3001G307400EntrezGene:8062838Gene3D:3.40.50.720GO:GO:0003674GO:GO:0003824
GO:GO:0008150GO:GO:0008152GO:GO:0016491GO:GO:0055114InterPro:NAD(P)-bd_dom_sfInterPro:SDR_fam
PANTHER:PTHR24320PANTHER:PTHR24320:SF146PFAM:PF00106PRINTS:PR00081ProteinID:EER91987ProteinID:EER91987.1
RefSeq:XP_002464989.1SUPFAM:SSF51735UniParc:UPI0001A8253FUniProt:C5WTF2MapMan:35.1:
Description
hypothetical protein
Coordinates
chr1:+:59275828..59278688
Molecular Weight (calculated)
33680.8 Da
IEP (calculated)
8.297
GRAVY (calculated)
0.202
Length
313 amino acids
Sequence
(BLAST)
001: MWWFYRKGPS GFSGASTAEE VTAGVDGHGL VAVITGATSG IGLETARVLV LRGVHVVMAV RNVSAGLVAK EAIVAKIPGA RIDVLELDLI SIASVRRFAS
101: EFDSLKLPLN ILINNAGVMT RNCTLSCDGL ELHFATNHIG HFLLTNLLLE NMKSTCRDRG IEGRIVNVTS SGHVMTYPEG ICFEKIRDPS GLNDFIAYGQ
201: SKLANILHSN ELSRIFKEEG VNISANSVHP GVIATNLFRG RTIVAVFLNT IGRIMCRSAE QGAATTCYVA MHPQVKGLSG KYFANCNVAS PSSQATDVEL
301: AKKLWQFSLE TVS
Best Arabidopsis Sequence Match ( AT4G11410.1 )
(BLAST)
001: MWPFWWKGAS GFSARSTAEE VTHGIDGTGL TAIVTGASSG IGEETTRVLA LRGVHVVMAV RNTDSGNQVR DKILKEIPQA KIDVMKLDLS SMASVRSFAS
101: EYQSLDLPLN LLINNAGIMA CPFLLSSDNI ELQFATNHLG HFLLTNLLLE RMKKTASESN REGRIVIVSS EGHRFAYREG VQFDKINDEA RYNTLQAYGQ
201: SKLGNILHAT ELARLFKEQG VNITANSLHP GSIMTNLLRY HSFINTIGNA VGKYVLKSIP QGAATTCYAA LHPQAKGVSG EYLMDNNISD PNSQGKDKDL
301: AKKLWEFSLR LTGEEES
Arabidopsis Description
NAD(P)-binding Rossmann-fold superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LDY7]
SUBAcon: [mitochondrion,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.