CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH35274	Soybean	cytosol, mitochondrion, plastid	93.93	81.89
KRH35271	Soybean	plastid	90.1	80.8
KRG91557	Soybean	cytosol	53.35	80.29
Solyc03g025410.2.1	Tomato	nucleus	78.27	78.27
PGSC0003DMT400040845	Potato	cytosol	77.96	77.96
KRH38432	Soybean	cytosol	78.91	77.43
KRH08897	Soybean	cytosol, mitochondrion	77.32	77.07
KRH08894	Soybean	plastid	53.04	76.5
KRH59919	Soybean	cytosol, plastid	72.84	72.38
GSMUA_AchrUn_...	Banana	cytosol	72.2	72.2
KRH08898	Soybean	cytosol	72.84	72.15
KRH38433	Soybean	cytosol	73.48	72.1
PGSC0003DMT400040847	Potato	cytosol	71.89	71.89
KRH38426	Soybean	cytosol	74.76	71.78
KRH41194	Soybean	cytosol, plastid	72.2	71.75
Solyc03g025390.2.1	Tomato	cytosol	71.57	71.57
Solyc03g025400.2.1	Tomato	cytosol	71.25	70.57
KRH38431	Soybean	plastid	72.2	69.97
GSMUA_Achr2P18620_001	Banana	plastid	70.29	69.62
EER96376	Sorghum	mitochondrion, plastid	70.29	69.62
Os09t0570300-01	Rice	plasma membrane	69.65	68.99
PGSC0003DMT400085601	Potato	plastid	35.46	68.94
TraesCS4D01G003200.1	Wheat	golgi	68.69	68.04
TraesCS4A01G311400.1	Wheat	mitochondrion, plastid	68.37	67.72
TraesCS4D01G002700.2	Wheat	mitochondrion, plastid	67.73	67.3
KRH38419	Soybean	plastid	68.37	67.08
TraesCS4B01G002900.1	Wheat	golgi	67.09	66.46
TraesCS4B01G003400.1	Wheat	plastid	66.13	65.71
OQU92195	Sorghum	cytosol	63.26	62.86
KRH08895	Soybean	cytosol	76.04	62.3
EER91987	Sorghum	plastid	61.98	61.98
TraesCS3B01G220800.1	Wheat	mitochondrion, plastid	22.68	61.74
TraesCS4A01G492800.1	Wheat	mitochondrion, plastid	22.68	61.74
TraesCS5B01G461100.1	Wheat	mitochondrion, plastid	22.68	61.74
TraesCS4D01G003400.2	Wheat	mitochondrion	63.26	61.49
Os10t0547900-01	Rice	cytosol	61.02	60.83
TraesCS1B01G221200.1	Wheat	cytosol	61.02	60.63
TraesCS1A01G207500.1	Wheat	cytosol	61.02	60.63
Zm00001d019754_P001	Maize	mitochondrion, plastid	68.37	60.62
Os10t0548000-02	Rice	cytosol, peroxisome, plastid	61.66	60.5
OQU92191	Sorghum	plastid	60.06	60.06
TraesCS1D01G210800.1	Wheat	plastid	60.38	59.43
Zm00001d047150_P003	Maize	plastid	59.74	59.37
Zm00001d029840_P003	Maize	plastid	63.26	59.28
KRH67540	Soybean	nucleus	60.06	58.2
KRG95813	Soybean	nucleus	59.42	57.59
KRH32305	Soybean	plastid	59.11	57.28
Os04t0291100-01	Rice	mitochondrion	56.87	56.69
Zm00001d025129_P001	Maize	mitochondrion	42.17	56.17
KRH19708	Soybean	nucleus	57.19	55.42
KRH54355	Soybean	cytosol	47.92	45.45
KRH57109	Soybean	mitochondrion	47.28	43.92
KRH03249	Soybean	mitochondrion, plastid	45.37	42.14
KRH63592	Soybean	plastid	47.6	41.85
KRH41377	Soybean	cytosol	45.05	41.84
VIT_16s0050g00750.t01	Wine grape	plastid	78.91	39.52
KRH55334	Soybean	plastid	36.1	28.32
KRH26074	Soybean	plastid	30.03	27.49
KRH27209	Soybean	nucleus, plastid	33.23	26.07
KRH38907	Soybean	endoplasmic reticulum	31.31	25.93
KRH09442	Soybean	cytosol	30.99	25.73

Protein Annotations

EMBL:ACUP02012691	EnsemblPlants:KRG91556	EnsemblPlantsGene:GLYMA_20G161200	Gene3D:3.40.50.720	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	InterPro:NAD(P)-bd_dom_sf	InterPro:SDR_fam
PANTHER:PTHR24320	PANTHER:PTHR24320:SF121	PFAM:PF00106	PRINTS:PR00081	ProteinID:KRG91556	ProteinID:KRG91556.1
SUPFAM:SSF51735	UniParc:UPI000233DE78	UniProt:I1NGW3	MapMan:23.1.3.5.1	:	:

Description

hypothetical protein

Coordinates

chr20:+:39914443..39920153

Molecular Weight (calculated)

34007.7 Da

IEP (calculated)

9.707

GRAVY (calculated)

-0.162

Length

313 amino acids

Sequence
(BLAST)

001: MWLFGRKGAS GFSSSSTAEQ VTEGIDGTGF TAIVTGASSG IGTETTRVLA LRGVHVIMGV RNMLAAKDVK ETILKEIPSA KVDAMELDLS SMKSVRKFAS
101: EFKSSGLPLN ILINNAGIMA CPFSLSKDKI ELQFATNHIG HFLLTNLLLD TIKKTSRESK KEGRIVNVSS EAHRFAYSEG ICFDKINDES SYNNWRAYGQ
201: SKLANILHAN ELTRRLKEDG VDISANSLHP GTITTNLFRH NSAVNGLINV IGRLVLKNVQ QGAATTCYVA LHPQVKGISG KYFSDSNLAK TTAQGTDSDL
301: AKKLWDFSMD LTK

Best Arabidopsis Sequence Match ( AT4G23420.2 )
(BLAST)

001: MWFFGSKGAS GFSSRSTAEE VTHGVDGTGL TAIVTGASSG IGVETARVLA LRGVHVVMAV RNTGAGAKVK EDIVKQVPGA KVDVMELELS SMESVRKFAS
101: EYKSAGLPLN LLINNAGIMA CPFMLSKDNI ELQFATNHLG HFLLTKLLLD TMKNTSRESK REGRIVNVSS EAHRYSYPEG VRFDKINDES SYSSIRAYGQ
201: SKLCNVLHAN ELAKQLKEDG VNITANSLHP GAIMTNLWGY FNSYLAGAVG AVAKYMVKSV PQGAATTCYV ALNPQVAGVT GEYFSDSNIA KPIELVKDTE
301: LAKKLWDFST KLTDSQ

Arabidopsis Description

NAD(P)-binding Rossmann-fold superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JNJ2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.