CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid

Predictor Summary:

plastid 5
cytosol 1
mitochondrion 5

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os09t0570300-01	Rice	plasma membrane	84.18	84.18
Zm00001d019754_P001	Maize	mitochondrion, plastid	93.04	83.29
TraesCS4B01G003400.1	Wheat	plastid	81.01	81.27
TraesCS4B01G002900.1	Wheat	golgi	81.01	81.01
TraesCS4D01G003200.1	Wheat	golgi	81.01	81.01
TraesCS4D01G002700.2	Wheat	mitochondrion, plastid	80.7	80.95
TraesCS4A01G311400.1	Wheat	mitochondrion, plastid	80.7	80.7
GSMUA_AchrUn_...	Banana	cytosol	75.32	76.04
TraesCS4D01G003400.2	Wheat	mitochondrion	75.0	73.6
TraesCS4A01G492800.1	Wheat	mitochondrion, plastid	25.63	70.43
TraesCS5B01G461100.1	Wheat	mitochondrion, plastid	25.63	70.43
KRG91556	Soybean	cytosol	69.62	70.29
PGSC0003DMT400040845	Potato	cytosol	68.99	69.65
TraesCS3B01G220800.1	Wheat	mitochondrion, plastid	25.32	69.57
KRH59919	Soybean	cytosol, plastid	69.3	69.52
Solyc03g025410.2.1	Tomato	nucleus	68.04	68.69
VIT_02s0025g03380.t01	Wine grape	cytosol	68.35	68.57
KRH41194	Soybean	cytosol, plastid	68.04	68.25
VIT_16s0050g00760.t01	Wine grape	plastid	67.09	67.73
PGSC0003DMT400040848	Potato	plastid	66.77	67.41
PGSC0003DMT400032133	Potato	cytosol	67.09	67.3
Solyc08g081200.2.1	Tomato	cytosol	66.77	66.98
KRH08894	Soybean	plastid	45.89	66.82
Solyc03g025370.2.1	Tomato	cytosol, nucleus, plastid	65.82	66.45
CDX86777	Canola	cytosol	66.46	66.25
Bra035220.1-P	Field mustard	cytosol	66.46	66.25
CDY13264	Canola	cytosol	65.82	65.62
AT4G11410.1	Thale cress	cytosol, mitochondrion	65.82	65.62
PGSC0003DMT400040847	Potato	cytosol	64.87	65.5
Solyc03g025390.2.1	Tomato	cytosol	64.56	65.18
KRH08897	Soybean	cytosol, mitochondrion	63.92	64.33
KRH38419	Soybean	plastid	64.56	63.95
Solyc03g025400.2.1	Tomato	cytosol	63.92	63.92
CDY10884	Canola	plastid	64.87	63.66
Bra020819.1-P	Field mustard	cytosol, plastid	64.56	63.35
CDX76338	Canola	cytosol, plastid	64.56	63.35
AT4G23430.2	Thale cress	plastid	64.56	63.35
KRH08898	Soybean	cytosol	63.29	63.29
Bra013690.1-P	Field mustard	plastid	64.56	62.96
KRH38433	Soybean	cytosol	62.97	62.38
KRH38432	Soybean	cytosol	62.97	62.38
KRH38426	Soybean	cytosol	63.61	61.66
CDY69917	Canola	endoplasmic reticulum	59.18	61.31
KRH35271	Soybean	plastid	67.09	60.74
AT4G23420.3	Thale cress	plastid	63.92	60.66
PGSC0003DMT400014810	Potato	mitochondrion	46.84	60.41
KRH35274	Soybean	cytosol, mitochondrion, plastid	68.35	60.17
EER91987	Sorghum	plastid	59.49	60.06
KRH38431	Soybean	plastid	61.39	60.06
OQU92195	Sorghum	cytosol	59.49	59.68
Solyc08g008060.1.1	Tomato	cytosol	59.18	59.37
PGSC0003DMT400085601	Potato	plastid	30.06	59.01
KRG91557	Soybean	cytosol	38.61	58.65
OQU92191	Sorghum	plastid	56.96	57.51
EES02479	Sorghum	cytosol, plastid	57.91	57.19
CDY44096	Canola	mitochondrion, plastid	64.87	56.79
KRH08895	Soybean	cytosol	63.61	52.62
EES08101	Sorghum	cytosol	59.18	50.95
EER87765	Sorghum	mitochondrion	49.68	43.61
OQU93381	Sorghum	mitochondrion	48.73	43.38
VIT_16s0050g00750.t01	Wine grape	plastid	69.94	35.36
EES11656	Sorghum	plastid	34.49	28.31
EER94008	Sorghum	plastid	31.01	24.87
EES04360	Sorghum	cytosol	32.59	24.35

Protein Annotations

MapMan:23.1.3.5.1	Gene3D:3.40.50.720	EntrezGene:8062560	UniProt:C5X6K3	EnsemblPlants:EER96376	ProteinID:EER96376
ProteinID:EER96376.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491
GO:GO:0055114	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00106	PRINTS:PR00080	PRINTS:PR00081	PANTHER:PTHR24320
PANTHER:PTHR24320:SF146	InterPro:SDR_fam	EnsemblPlantsGene:SORBI_3002G137300	SUPFAM:SSF51735	unigene:Sbi.2063	UniParc:UPI0001A83607
RefSeq:XP_002459855.1	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr2:+:20906943..20910888

Molecular Weight (calculated)

34296.2 Da

IEP (calculated)

7.808

GRAVY (calculated)

0.017

Length

316 amino acids

Sequence
(BLAST)

001: MMTSWLLGRR GASGFSWSST ADQVTQGISA AGLTAIVTGA SSGIGAETAR TLALRGAHVV MAVRSLPAAQ AVRDAVLAQA PEAKLDVMEL DLSSMASVRA
101: FASQFIDRGL PLNILINNAG VMAIPFELSK DGIEMQFATN HVGHFLLTHL LLDTMKKTSR ESNVEGRIVN VSSEGHRFAY QEGIRFDKIN DESVYSIFGA
201: YGQSKLANIL HANELARRFQ EENVNITANS LHPGSIITNL LRHHSIIDVL HRTLGKLVLK NAEQGAATTC YVALHPQVKG VSGKYFCDSN LYEPSAKAKD
301: MELAKRLWDF SVELVT

Best Arabidopsis Sequence Match ( AT4G11410.1 )
(BLAST)

001: MWPFWWKGAS GFSARSTAEE VTHGIDGTGL TAIVTGASSG IGEETTRVLA LRGVHVVMAV RNTDSGNQVR DKILKEIPQA KIDVMKLDLS SMASVRSFAS
101: EYQSLDLPLN LLINNAGIMA CPFLLSSDNI ELQFATNHLG HFLLTNLLLE RMKKTASESN REGRIVIVSS EGHRFAYREG VQFDKINDEA RYNTLQAYGQ
201: SKLGNILHAT ELARLFKEQG VNITANSLHP GSIMTNLLRY HSFINTIGNA VGKYVLKSIP QGAATTCYAA LHPQAKGVSG EYLMDNNISD PNSQGKDKDL
301: AKKLWEFSLR LTGEEES

Arabidopsis Description

NAD(P)-binding Rossmann-fold superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LDY7]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.