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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 2
  • plastid 2
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc08g081200.2.1 Tomato cytosol 98.1 98.1
VIT_02s0025g03380.t01 Wine grape cytosol 73.97 73.97
KRH59919 Soybean cytosol, plastid 72.38 72.38
KRH41194 Soybean cytosol, plastid 71.75 71.75
AT4G11410.1 Thale cress cytosol, mitochondrion 71.43 70.98
GSMUA_AchrUn_... Banana cytosol 70.16 70.61
CDX86777 Canola cytosol 70.48 70.03
Bra035220.1-P Field mustard cytosol 70.48 70.03
CDY13264 Canola cytosol 70.16 69.72
PGSC0003DMT400040845 Potato cytosol 69.21 69.65
CDY10884 Canola plastid 70.79 69.25
Bra013690.1-P Field mustard plastid 70.48 68.52
CDX76338 Canola cytosol, plastid 69.84 68.32
Bra020819.1-P Field mustard cytosol, plastid 69.84 68.32
PGSC0003DMT400040848 Potato plastid 67.62 68.05
AT4G23430.2 Thale cress plastid 69.21 67.7
PGSC0003DMT400040847 Potato cytosol 66.98 67.41
Os09t0570300-01 Rice plasma membrane 67.62 67.41
PGSC0003DMT400014810 Potato mitochondrion 52.38 67.35
EER96376 Sorghum mitochondrion, plastid 67.3 67.09
GSMUA_Achr2P18620_001 Banana plastid 66.03 65.82
TraesCS4B01G003400.1 Wheat plastid 65.4 65.4
CDY69917 Canola endoplasmic reticulum 63.17 65.25
TraesCS4B01G002900.1 Wheat golgi 65.08 64.87
TraesCS4D01G003200.1 Wheat golgi 65.08 64.87
AT4G23420.3 Thale cress plastid 68.57 64.86
TraesCS4D01G002700.2 Wheat mitochondrion, plastid 64.76 64.76
TraesCS4A01G311400.1 Wheat mitochondrion, plastid 64.76 64.56
TraesCS5B01G461100.1 Wheat mitochondrion, plastid 23.17 63.48
PGSC0003DMT400085601 Potato plastid 31.75 62.11
CDY44096 Canola mitochondrion, plastid 70.79 61.77
TraesCS4A01G492800.1 Wheat mitochondrion, plastid 22.54 61.74
OQU92195 Sorghum cytosol 61.59 61.59
EER91987 Sorghum plastid 60.63 61.02
TraesCS3B01G220800.1 Wheat mitochondrion, plastid 22.22 60.87
TraesCS4D01G003400.2 Wheat mitochondrion 61.59 60.25
TraesCS1B01G221200.1 Wheat cytosol 59.37 59.37
OQU92191 Sorghum plastid 58.73 59.11
TraesCS1A01G207500.1 Wheat cytosol 59.05 59.05
Zm00001d047150_P003 Maize plastid 58.73 58.73
Zm00001d019754_P001 Maize mitochondrion, plastid 65.4 58.36
TraesCS1D01G210800.1 Wheat plastid 58.73 58.18
Os04t0291100-01 Rice mitochondrion 57.78 57.96
Os10t0548000-02 Rice cytosol, peroxisome, plastid 58.1 57.37
Os10t0547900-01 Rice cytosol 56.83 57.01
Zm00001d025129_P001 Maize mitochondrion 42.22 56.6
Zm00001d029840_P003 Maize plastid 59.05 55.69
PGSC0003DMT400049292 Potato mitochondrion 56.83 55.42
PGSC0003DMT400022813 Potato mitochondrion 56.19 55.31
PGSC0003DMT400069439 Potato plastid 33.97 43.85
PGSC0003DMT400046811 Potato plastid 45.71 43.5
PGSC0003DMT400031933 Potato cytosol 46.03 43.03
PGSC0003DMT400026316 Potato cytosol 33.02 27.01
PGSC0003DMT400047264 Potato plastid 33.97 26.88
PGSC0003DMT400064369 Potato plastid 33.97 26.88
PGSC0003DMT400039734 Potato plastid 33.33 26.45
PGSC0003DMT400073742 Potato cytosol 30.16 26.17
Protein Annotations
EnsemblPlants:PGSC0003DMT400032133EnsemblPlantsGene:PGSC0003DMG400012336EntrezGene:102595507Gene3D:3.40.50.720InterPro:NAD(P)-bd_dom_sfInterPro:SDR_fam
PANTHER:PTHR24320PANTHER:PTHR24320:SF146PFAM:PF00106PGSC:PGSC0003DMG400012336PRINTS:PR00080PRINTS:PR00081
RefSeq:XP_006343970.1SEG:segSUPFAM:SSF51735UniParc:UPI000296B0E3UniProt:M1AWX9MapMan:23.1.3.5.1
Description
Short-chain dehydrogenase [Source:PGSC_GENE;Acc:PGSC0003DMG400012336]
Coordinates
chr8:+:54880519..54884516
Molecular Weight (calculated)
34242.9 Da
IEP (calculated)
7.391
GRAVY (calculated)
-0.141
Length
315 amino acids
Sequence
(BLAST)
001: MWLFGLKGAS GFSASSTAEE VTQGIDATGL TAIVTGASSG IGAETTRVLA MRGAHVVMAV RNVKSGEEVK ESILKDIPRA KLDVMELDLG SMESVRKFAS
101: EYNSTGYPLN ILINNAGVMA PPFMLSQDNI ELQFATNHLG HFLLTNLLLQ NLKNTAQASH KEGRIVNVSS LGHRFTYREG IRFDKINDKD SYTAILAYGQ
201: SKLANILHAN ELARHFKEEG AEITANSLHP GSITTNLLRH QSLVEGLVNW IGKYFIKNIP QGAATTCYVA LHPQVKGITG EYFSDSNISA STSQGTDAEL
301: AKKLWDFSLN LTKPQ
Best Arabidopsis Sequence Match ( AT4G11410.1 )
(BLAST)
001: MWPFWWKGAS GFSARSTAEE VTHGIDGTGL TAIVTGASSG IGEETTRVLA LRGVHVVMAV RNTDSGNQVR DKILKEIPQA KIDVMKLDLS SMASVRSFAS
101: EYQSLDLPLN LLINNAGIMA CPFLLSSDNI ELQFATNHLG HFLLTNLLLE RMKKTASESN REGRIVIVSS EGHRFAYREG VQFDKINDEA RYNTLQAYGQ
201: SKLGNILHAT ELARLFKEQG VNITANSLHP GSIMTNLLRY HSFINTIGNA VGKYVLKSIP QGAATTCYAA LHPQAKGVSG EYLMDNNISD PNSQGKDKDL
301: AKKLWEFSLR LTGEEES
Arabidopsis Description
NAD(P)-binding Rossmann-fold superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LDY7]
SUBAcon: [mitochondrion,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.