Factsheet for VIT_02s0025g03380.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH41194	Soybean	cytosol, plastid	75.24	75.24
GSMUA_AchrUn_...	Banana	cytosol	74.6	75.08
VIT_16s0050g00760.t01	Wine grape	plastid	74.6	75.08
KRH59919	Soybean	cytosol, plastid	74.92	74.92
AT4G11410.1	Thale cress	cytosol, mitochondrion	75.24	74.76
Solyc08g081200.2.1	Tomato	cytosol	73.97	73.97
PGSC0003DMT400032133	Potato	cytosol	73.97	73.97
CDY10884	Canola	plastid	73.97	72.36
Bra035220.1-P	Field mustard	cytosol	72.38	71.92
CDX86777	Canola	cytosol	72.38	71.92
CDY13264	Canola	cytosol	72.06	71.61
Bra013690.1-P	Field mustard	plastid	73.65	71.6
AT4G23430.2	Thale cress	plastid	73.02	71.43
Solyc08g008060.1.1	Tomato	cytosol	71.11	71.11
PGSC0003DMT400014810	Potato	mitochondrion	54.6	70.2
Os09t0570300-01	Rice	plasma membrane	69.21	68.99
GSMUA_Achr2P18620_001	Banana	plastid	69.21	68.99
AT4G23420.3	Thale cress	plastid	72.38	68.47
EER96376	Sorghum	mitochondrion, plastid	68.57	68.35
TraesCS4B01G002900.1	Wheat	golgi	67.94	67.72
Bra020819.1-P	Field mustard	cytosol, plastid	69.21	67.7
CDX76338	Canola	cytosol, plastid	69.21	67.7
TraesCS4D01G002700.2	Wheat	mitochondrion, plastid	67.62	67.62
TraesCS4D01G003200.1	Wheat	golgi	67.62	67.41
TraesCS4A01G311400.1	Wheat	mitochondrion, plastid	66.67	66.46
TraesCS4B01G003400.1	Wheat	plastid	66.35	66.35
CDY69917	Canola	endoplasmic reticulum	63.49	65.57
CDY44096	Canola	mitochondrion, plastid	73.97	64.54
EER91987	Sorghum	plastid	63.17	63.58
Zm00001d047150_P003	Maize	plastid	62.86	62.86
OQU92195	Sorghum	cytosol	62.86	62.86
TraesCS4D01G003400.2	Wheat	mitochondrion	64.13	62.73
TraesCS1B01G221200.1	Wheat	cytosol	62.54	62.54
TraesCS1A01G207500.1	Wheat	cytosol	61.59	61.59
OQU92191	Sorghum	plastid	60.95	61.34
TraesCS1D01G210800.1	Wheat	plastid	61.59	61.01
Zm00001d019754_P001	Maize	mitochondrion, plastid	67.62	60.34
Os10t0548000-02	Rice	cytosol, peroxisome, plastid	60.32	59.56
TraesCS4A01G492800.1	Wheat	mitochondrion, plastid	21.59	59.13
Os10t0547900-01	Rice	cytosol	58.41	58.6
TraesCS3B01G220800.1	Wheat	mitochondrion, plastid	21.27	58.26
TraesCS5B01G461100.1	Wheat	mitochondrion, plastid	21.27	58.26
Os04t0291100-01	Rice	mitochondrion	57.14	57.32
Zm00001d029840_P003	Maize	plastid	60.63	57.19
VIT_08s0040g03400.t01	Wine grape	plastid	58.73	57.1
Zm00001d025129_P001	Maize	mitochondrion	42.54	57.02
VIT_17s0000g08920.t01	Wine grape	cytosol	46.03	43.94
VIT_02s0025g02190.t01	Wine grape	cytosol	46.67	43.75
VIT_16s0050g00750.t01	Wine grape	plastid	76.19	38.4
VIT_17s0000g00520.t01	Wine grape	cytosol, mitochondrion, peroxisome	32.38	27.49
VIT_12s0059g00270.t01	Wine grape	plastid	34.29	27.07
VIT_19s0014g03160.t01	Wine grape	plastid	32.38	25.76

Protein Annotations

EntrezGene:100253030	wikigene:100253030	MapMan:23.1.3.5.1	Gene3D:3.40.50.720	ProteinID:CBI34658	ProteinID:CBI34658.3
UniProt:D7TVY3	EMBL:FN596251	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152
GO:GO:0016491	GO:GO:0055114	EntrezGene:LOC100253030	wikigene:LOC100253030	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00106
PRINTS:PR00080	PRINTS:PR00081	PANTHER:PTHR24320	PANTHER:PTHR24320:SF146	InterPro:SDR_fam	SUPFAM:SSF51735
TIGR:TC61264	UniParc:UPI00015CC4EA	ArrayExpress:VIT_02s0025g03380	EnsemblPlantsGene:VIT_02s0025g03380	EnsemblPlants:VIT_02s0025g03380.t01	unigene:Vvi.1739
RefSeq:XP_002274932	RefSeq:XP_002274932.1	RefSeq:XP_002275257	RefSeq:XP_002275257.1	SEG:seg	:

Description

No Description!

Coordinates

chr2:-:2883782..2889055

Molecular Weight (calculated)

34019.7 Da

IEP (calculated)

6.859

GRAVY (calculated)

-0.086

Length

315 amino acids

Sequence
(BLAST)

001: MWIFGRKGPS GFSACSTAEE VAQGIDGNGL TAVVTGASSG IGTETSRVLA LHGVHVIMAV RNVDAGRNVK ETILKEIPTA KVDVMELDLS SLPSVRKFAS
101: EYKSLGLPLN LLINNAGVMA TPFLLSHDNI ELQFATNHLG HFLLTNLLLE TMKNTARESG REGRIVNVSS EGHRFPYSEG ICFDKINDES AYNSVYAYGQ
201: SKLANILHAN ELAKRLQEEG VEITANSLHP GAIATNLLRY HSFLDGIVNM VGKYVLKNIP QGAATTCYVA LHPQVKGVSG EYFADSNIAK PSSKGKDAEL
301: GKKLWEFSIS LTEPN

Best Arabidopsis Sequence Match ( AT4G11410.1 )
(BLAST)

001: MWPFWWKGAS GFSARSTAEE VTHGIDGTGL TAIVTGASSG IGEETTRVLA LRGVHVVMAV RNTDSGNQVR DKILKEIPQA KIDVMKLDLS SMASVRSFAS
101: EYQSLDLPLN LLINNAGIMA CPFLLSSDNI ELQFATNHLG HFLLTNLLLE RMKKTASESN REGRIVIVSS EGHRFAYREG VQFDKINDEA RYNTLQAYGQ
201: SKLGNILHAT ELARLFKEQG VNITANSLHP GSIMTNLLRY HSFINTIGNA VGKYVLKSIP QGAATTCYAA LHPQAKGVSG EYLMDNNISD PNSQGKDKDL
301: AKKLWEFSLR LTGEEES

Arabidopsis Description

NAD(P)-binding Rossmann-fold superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LDY7]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.