Factsheet for TraesCS4D01G003400.2

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G002900.1	Wheat	golgi	85.09	86.71
TraesCS4D01G003200.1	Wheat	golgi	83.85	85.44
TraesCS4D01G002700.2	Wheat	mitochondrion, plastid	83.23	85.08
TraesCS5B01G461100.1	Wheat	mitochondrion, plastid	29.5	82.61
TraesCS4A01G492800.1	Wheat	mitochondrion, plastid	29.5	82.61
TraesCS3B01G220800.1	Wheat	mitochondrion, plastid	29.19	81.74
Os09t0570300-01	Rice	plasma membrane	73.91	75.32
EER96376	Sorghum	mitochondrion, plastid	73.6	75.0
GSMUA_AchrUn_...	Banana	cytosol	68.94	70.93
PGSC0003DMT400040845	Potato	cytosol	63.98	65.81
PGSC0003DMT400040848	Potato	plastid	63.66	65.5
Solyc03g025410.2.1	Tomato	nucleus	63.66	65.5
Solyc03g025370.2.1	Tomato	cytosol, nucleus, plastid	62.73	64.54
KRH08894	Soybean	plastid	43.48	64.52
KRH59919	Soybean	cytosol, plastid	63.04	64.44
Zm00001d019754_P001	Maize	mitochondrion, plastid	70.5	64.31
VIT_16s0050g00760.t01	Wine grape	plastid	62.42	64.22
VIT_02s0025g03380.t01	Wine grape	cytosol	62.73	64.13
CDX86777	Canola	cytosol	63.04	64.04
Bra035220.1-P	Field mustard	cytosol	63.04	64.04
AT4G11410.1	Thale cress	cytosol, mitochondrion	63.04	64.04
KRH41194	Soybean	cytosol, plastid	62.42	63.81
PGSC0003DMT400040847	Potato	cytosol	61.8	63.58
CDY13264	Canola	cytosol	62.42	63.41
KRG91556	Soybean	cytosol	61.49	63.26
Solyc03g025390.2.1	Tomato	cytosol	61.18	62.94
Solyc08g081200.2.1	Tomato	cytosol	60.25	61.59
PGSC0003DMT400032133	Potato	cytosol	60.25	61.59
PGSC0003DMT400085601	Potato	plastid	30.43	60.87
KRH08897	Soybean	cytosol, mitochondrion	59.32	60.83
KRH38419	Soybean	plastid	60.25	60.81
Solyc03g025400.2.1	Tomato	cytosol	59.63	60.76
CDY10884	Canola	plastid	59.63	59.63
KRH38433	Soybean	cytosol	58.7	59.25
KRH08898	Soybean	cytosol	58.07	59.18
AT4G23430.2	Thale cress	plastid	58.39	58.39
Bra013690.1-P	Field mustard	plastid	58.7	58.33
Bra020819.1-P	Field mustard	cytosol, plastid	57.76	57.76
CDX76338	Canola	cytosol, plastid	57.76	57.76
KRH38432	Soybean	cytosol	57.14	57.68
KRH38426	Soybean	cytosol	58.07	57.36
KRH35271	Soybean	plastid	61.18	56.45
KRG91557	Soybean	cytosol	36.34	56.25
AT4G23420.3	Thale cress	plastid	58.07	56.16
KRH38431	Soybean	plastid	56.21	56.04
PGSC0003DMT400014810	Potato	mitochondrion	42.55	55.92
Solyc08g008060.1.1	Tomato	cytosol	54.66	55.87
CDY69917	Canola	endoplasmic reticulum	52.48	55.41
TraesCS1D01G210800.1	Wheat	plastid	54.35	55.03
KRH35274	Soybean	cytosol, mitochondrion, plastid	61.18	54.87
TraesCS4D01G093500.1	Wheat	mitochondrion	53.11	52.94
CDY44096	Canola	mitochondrion, plastid	59.01	52.63
TraesCS5D01G287000.1	Wheat	plastid	51.86	51.86
KRH08895	Soybean	cytosol	57.76	48.69
TraesCS4D01G351800.1	Wheat	mitochondrion	44.41	42.81
TraesCS3D01G077500.2	Wheat	cytosol, plastid	45.65	42.0
TraesCS4D01G351700.1	Wheat	mitochondrion, plastid	44.41	40.62
TraesCS7D01G055800.1	Wheat	mitochondrion, plastid	44.1	39.23
VIT_16s0050g00750.t01	Wine grape	plastid	64.91	33.44
TraesCS2D01G563700.1	Wheat	cytosol	22.67	30.29
TraesCS2D01G563600.1	Wheat	golgi, plastid	32.61	27.06
TraesCS1D01G168700.2	Wheat	plastid	30.12	23.26
TraesCS6D01G051500.1	Wheat	cytosol	29.5	23.23

Protein Annotations

EnsemblPlants:TraesCS4D01G003400.2	EnsemblPlantsGene:TraesCS4D01G003400	Gene3D:3.40.50.720	InterPro:NAD(P)-bd_dom_sf	InterPro:SDR_fam	PANTHER:PTHR24320
PANTHER:PTHR24320:SF146	PFAM:PF00106	PRINTS:PR00081	SUPFAM:SSF51735	TIGR:cd05327	MapMan:35.1

Description

No Description!

Coordinates

chr4D:-:1405273..1407055

Molecular Weight (calculated)

34384.2 Da

IEP (calculated)

8.979

GRAVY (calculated)

0.056

Length

322 amino acids

Sequence
(BLAST)

001: MLSWKFSRKG ATGFSWASTA DEVTAGVTAS GLTAIVTGAS SGIGAETARV LAARGAHVVM AVRNLAAGDT VRQAVLAETP AASVDLMELD VSSLASVRNF
101: AADFAARGLP LNILVNNAGI MATPFTLSKD GIEMQFATNH VGHFLLTHLV LDTMKKTSRE SNVEGRIVIV ASEGHRVTYK EGIRFAKIND EQGYGTLAAY
201: GQSKLANILH AGELARRFKE EGVNITANSL HPGSILTNLL RNRGIIYAFA SVFAAIERTL GKLLLKNIQQ GAATQCYLAL HPDAKGVSGK YWCDSNLYEP
301: SDKAKDAELG KKLWDYTLDL VA

Best Arabidopsis Sequence Match ( AT4G11410.1 )
(BLAST)

001: MWPFWWKGAS GFSARSTAEE VTHGIDGTGL TAIVTGASSG IGEETTRVLA LRGVHVVMAV RNTDSGNQVR DKILKEIPQA KIDVMKLDLS SMASVRSFAS
101: EYQSLDLPLN LLINNAGIMA CPFLLSSDNI ELQFATNHLG HFLLTNLLLE RMKKTASESN REGRIVIVSS EGHRFAYREG VQFDKINDEA RYNTLQAYGQ
201: SKLGNILHAT ELARLFKEQG VNITANSLHP GSIMTNLLRY HSFINTIGNA VGKYVLKSIP QGAATTCYAA LHPQAKGVSG EYLMDNNISD PNSQGKDKDL
301: AKKLWEFSLR LTGEEES

Arabidopsis Description

NAD(P)-binding Rossmann-fold superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LDY7]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.