Factsheet for TraesCS4D01G093500.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 4
nucleus 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, nucleus, plastid
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G218300.1	Wheat	mitochondrion	98.76	98.76
TraesCS4B01G097100.1	Wheat	mitochondrion	98.45	98.45
HORVU4Hr1G018230.1	Barley	plastid	96.9	80.67
Os11t0181800-01	Rice	plasma membrane	78.64	77.2
Os11t0181700-02	Rice	cytosol, mitochondrion	74.3	72.29
GSMUA_Achr2P08080_001	Banana	mitochondrion	72.45	72.0
EES08101	Sorghum	cytosol	78.95	69.48
Zm00001d053067_P001	Maize	plastid	77.71	68.39
TraesCS5D01G287000.1	Wheat	plastid	55.73	55.9
TraesCS4D01G002700.2	Wheat	mitochondrion, plastid	54.18	55.56
TraesCS4D01G003200.1	Wheat	golgi	53.87	55.06
TraesCS4D01G003400.2	Wheat	mitochondrion	52.94	53.11
TraesCS1D01G210800.1	Wheat	plastid	48.3	49.06
TraesCS4D01G351800.1	Wheat	mitochondrion	47.06	45.51
TraesCS3D01G077500.2	Wheat	cytosol, plastid	47.99	44.29
TraesCS4D01G351700.1	Wheat	mitochondrion, plastid	46.13	42.33
TraesCS7D01G055800.1	Wheat	mitochondrion, plastid	45.51	40.61
GSMUA_Achr3P22130_001	Banana	cytosol	65.33	29.97
TraesCS2D01G563700.1	Wheat	cytosol	20.43	27.39
TraesCS2D01G563600.1	Wheat	golgi, plastid	28.48	23.71
TraesCS6D01G051500.1	Wheat	cytosol	29.72	23.47
TraesCS1D01G168700.2	Wheat	plastid	27.24	21.1

Protein Annotations

EnsemblPlants:TraesCS4D01G093500.1	EnsemblPlantsGene:TraesCS4D01G093500	Gene3D:3.40.50.720	InterPro:NAD(P)-bd_dom_sf	InterPro:SDR_fam	PANTHER:PTHR31942
PANTHER:PTHR31942:SF36	PFAM:PF00106	PRINTS:PR00080	PRINTS:PR00081	SEG:seg	SUPFAM:SSF51735
TIGR:cd05327	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr4D:+:68808765..68811024

Molecular Weight (calculated)

34902.6 Da

IEP (calculated)

9.163

GRAVY (calculated)

-0.146

Length

323 amino acids

Sequence
(BLAST)

001: MGIWGWPWGR RGLSGFGSAS TAEDIAAGID ASHLTAIVTG ATNGIGKETA RVLALRGANV IIPARTLESG MKVKESLAEE VPSSKLHVME MDLSSLDSVR
101: SFAGSFNSSH KHLNVLINNA GIMACPFQLS KDGIELQFAT NHLGHFLLTN LLLDKMKSTA KETGVQGRIV NLASTAHRRS DGKGFDLNKL NNESKYNAFS
201: AYSHSKLANI LHANELSRRF QEEGCDLTAN SLHPGIIGTN IVRYITTNSV LASIFSLVKP FVKDIPQGAA TTCYVALHPD TKRVSGKYFA GCNEATPTSV
301: ARDAELAKRL WAFSEELVEN RSK

Best Arabidopsis Sequence Match ( AT2G37540.1 )
(BLAST)

001: MGIYGVMTGK KGKSGFGSAS TAEDVTQAID ASHLTAIITG GTSGIGLEAA RVLAMRGAHV IIAARNPKAA NESKEMILQM NPNARVDYLQ IDVSSIKSVR
101: SFVDQFLALN VPLNILINNA GVMFCPFKLT EDGIESQFAT NHIGHFLLTN LLLDKMKSTA RESGVQGRIV NLSSIAHTYT YSEGIKFQGI NDPAGYSERR
201: AYGQSKLSNL LHSNALSRRL QEEGVNITIN SVHPGLVTTN LFRYSGFSMK VFRAMTFLFW KNIPQGAATT CYVALHPDLE GVTGKYFGDC NIVAPSKFAT
301: NNSLADKLWD FSVFLIDSIS K

Arabidopsis Description

NAD(P)-binding Rossmann-fold superfamily protein [Source:UniProtKB/TrEMBL;Acc:O80924]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.