Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr2P08080_001 | Banana | mitochondrion | 31.68 | 68.62 |
| TraesCS4D01G093500.1 | Wheat | mitochondrion | 29.97 | 65.33 |
| Os11t0181800-01 | Rice | plasma membrane | 30.26 | 64.74 |
| TraesCS4B01G097100.1 | Wheat | mitochondrion | 29.69 | 64.71 |
| TraesCS4A01G218300.1 | Wheat | mitochondrion | 29.69 | 64.71 |
| Os11t0181700-02 | Rice | cytosol, mitochondrion | 28.55 | 60.54 |
| EES08101 | Sorghum | cytosol | 30.82 | 59.13 |
| Zm00001d053067_P001 | Maize | plastid | 29.69 | 56.95 |
| GSMUA_Achr8P20890_001 | Banana | cytosol, mitochondrion, plastid | 25.43 | 55.94 |
| GSMUA_AchrUn_... | Banana | cytosol | 24.86 | 55.91 |
| GSMUA_Achr10P... | Banana | cytosol, mitochondrion, plastid | 25.28 | 55.45 |
| GSMUA_Achr2P18620_001 | Banana | plastid | 24.43 | 54.43 |
| HORVU4Hr1G018230.1 | Barley | plastid | 29.83 | 54.12 |
| GSMUA_Achr7P15240_001 | Banana | plastid | 24.72 | 53.7 |
| GSMUA_Achr11P... | Banana | cytosol | 24.29 | 52.78 |
| GSMUA_Achr11P... | Banana | cytosol | 21.16 | 43.19 |
| GSMUA_Achr1P25440_001 | Banana | cytosol | 18.47 | 42.21 |
| GSMUA_Achr8P11870_001 | Banana | cytosol | 20.03 | 41.47 |
| GSMUA_Achr7P04190_001 | Banana | cytosol | 14.63 | 25.12 |
| GSMUA_Achr3P14270_001 | Banana | plastid | 12.5 | 22.74 |
| GSMUA_Achr11P... | Banana | plastid | 12.36 | 21.97 |
| GSMUA_Achr7P04280_001 | Banana | plastid | 12.22 | 21.61 |
| GSMUA_AchrUn_... | Banana | cytosol | 4.69 | 12.99 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr3P22130_001 | EnsemblPlants:GSMUA_Achr3T22130_001 | EnsemblPlantsGene:GSMUA_Achr3G22130_001 | Gene3D:3.40.50.720 | InterPro:DUF3727 | InterPro:NAD(P)-bd_dom_sf |
| InterPro:SDR_fam | PANTHER:PTHR31942 | PANTHER:PTHR31942:SF36 | PFAM:PF00106 | PFAM:PF12527 | PRINTS:PR00081 |
| SEG:seg | SUPFAM:SSF51735 | UniParc:UPI000296540E | UniProt:M0SGS9 | MapMan:35.1 | : |
Description
oxidoreductase, short chain dehydrogenase/reductase family domain containing family, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr3G22130_001]
Coordinates
chr3:-:23032822..23042504
Molecular Weight (calculated)
76920.4 Da
IEP (calculated)
5.977
GRAVY (calculated)
-0.174
Length
704 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSWNWIPLF WKGDKVSSRG FHSSSTAEEV TEGIDASQLT AIVTGATSGI GKETARVLAL RGATVVIPCR SLESGGKVKE SILEQNADAK IHVMEMDLSS
101: LDSVESFARS FNSSYERLNI LINNAGIMAC PFQLSKDGIE MQFATNHLGH FLLTNLLMNK MIVTAEETGI QGRIVSVSSL GHSSKFDESW FNLEKINDQS
201: NYGPFAAYSH SKLANIWHAN ELSRRLQEKG CNITANSLHP GAIHTNLCRY LNISSFILDA IAVATKPFLK SIPQGASTTC YLALHPDMKD VTGKYSGDCN
301: ETLPSAVARD EELSIKCWEF SQQLLNNLRG PIVPPPSLRS SSSPVFSLTC ATSRSPAHLP FEAQQSPSPP YVHDSQLESE SRFFARSFRL TSCLHRRSPL
401: KMMGVSAASP SSFFLPHARS HLGPSRFTSL PVLIPASKKR PGFCCATKQQ QQTGAAKKKA GRRKAPERPP VDDGGRLVDV VPGPQNRRSH SSPLPKPPAG
501: FVLDDHGRVL LASSKRIVTI MDATNNLPLE CVIRRVFQSS EGDECMLLCP VDPPVQILKS TNFDGWSAVD DEEIEAIIPA AAYALAKIHM HLVASGFCYT
601: ARGGFCYSDE DILEFHTDDG EAIEGFPTEA VKITCFNLDG THYMIYTPSD PLLFVAVRDK NGVLQIADDD LLEDPAIISA IDEETEFNAL VEEEAALLES
701: LLGE
101: LDSVESFARS FNSSYERLNI LINNAGIMAC PFQLSKDGIE MQFATNHLGH FLLTNLLMNK MIVTAEETGI QGRIVSVSSL GHSSKFDESW FNLEKINDQS
201: NYGPFAAYSH SKLANIWHAN ELSRRLQEKG CNITANSLHP GAIHTNLCRY LNISSFILDA IAVATKPFLK SIPQGASTTC YLALHPDMKD VTGKYSGDCN
301: ETLPSAVARD EELSIKCWEF SQQLLNNLRG PIVPPPSLRS SSSPVFSLTC ATSRSPAHLP FEAQQSPSPP YVHDSQLESE SRFFARSFRL TSCLHRRSPL
401: KMMGVSAASP SSFFLPHARS HLGPSRFTSL PVLIPASKKR PGFCCATKQQ QQTGAAKKKA GRRKAPERPP VDDGGRLVDV VPGPQNRRSH SSPLPKPPAG
501: FVLDDHGRVL LASSKRIVTI MDATNNLPLE CVIRRVFQSS EGDECMLLCP VDPPVQILKS TNFDGWSAVD DEEIEAIIPA AAYALAKIHM HLVASGFCYT
601: ARGGFCYSDE DILEFHTDDG EAIEGFPTEA VKITCFNLDG THYMIYTPSD PLLFVAVRDK NGVLQIADDD LLEDPAIISA IDEETEFNAL VEEEAALLES
701: LLGE
001: MAFSYSLTSP SPNSTLSYSS THQFLNPSSS FPVSLSVSSP KNTRHLRLLI TSALNPQTGQ PTKKASTGSD KSSTNKKRKK KGKIAKPVED WELRDSEDAF
101: EEDDDADYSS SSSSLATFNS PPTIPKPPAG FVINETGRVL MASKKRITTV IDPTNNSPLD CVIRRVFTSS KGEDCMLLCP VDTPVQILKS TNIDGWSAVS
201: DEEVESLLPA AAYALAKIHM HLVHSGFCYT ARGGFCYTED NVFDFRTDDG QDVEGLPTEG VEITCFHLDG SHYMVYTPSD PLLFVAAKDQ NGLLQIADDE
301: LLDDPAVISA IDEETEFNAL VEEEAALLES LLGERI
101: EEDDDADYSS SSSSLATFNS PPTIPKPPAG FVINETGRVL MASKKRITTV IDPTNNSPLD CVIRRVFTSS KGEDCMLLCP VDTPVQILKS TNIDGWSAVS
201: DEEVESLLPA AAYALAKIHM HLVHSGFCYT ARGGFCYTED NVFDFRTDDG QDVEGLPTEG VEITCFHLDG SHYMVYTPSD PLLFVAAKDQ NGLLQIADDE
301: LLDDPAVISA IDEETEFNAL VEEEAALLES LLGERI
Arabidopsis Description
At4g33480 [Source:UniProtKB/TrEMBL;Acc:A2RVW1]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.