Factsheet for GSMUA_AchrUn_randomP04920_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 4
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	plastid
WoLF PSORT:	cytosol
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	plastid	59.84	38.38
GSMUA_Achr3P14270_001	Banana	plastid	53.94	35.4
GSMUA_Achr7P04280_001	Banana	plastid	54.72	34.92
GSMUA_AchrUn_...	Banana	cytosol	18.11	14.7
GSMUA_Achr10P...	Banana	cytosol, mitochondrion, plastid	16.93	13.4
GSMUA_Achr2P18620_001	Banana	plastid	16.54	13.29
GSMUA_Achr8P20890_001	Banana	cytosol, mitochondrion, plastid	15.35	12.19
GSMUA_Achr11P...	Banana	cytosol	15.35	12.04
GSMUA_Achr7P15240_001	Banana	plastid	15.35	12.04
GSMUA_Achr2P08080_001	Banana	mitochondrion	14.57	11.38
GSMUA_Achr11P...	Banana	cytosol	14.96	11.01
GSMUA_Achr8P11870_001	Banana	cytosol	14.57	10.88
GSMUA_Achr1P25440_001	Banana	cytosol	11.42	9.42
GSMUA_Achr7P04190_001	Banana	cytosol	13.39	8.29
GSMUA_Achr3P22130_001	Banana	cytosol	12.99	4.69

Protein Annotations

EnsemblPlants:GSMUA_AchrUn_randomP04920_001	EnsemblPlants:GSMUA_AchrUn_randomT04920_001	EnsemblPlantsGene:GSMUA_AchrUn_randomG04920_001	Gene3D:3.40.50.720	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0016630	GO:GO:0055114	InterPro:NAD(P)-bd_dom_sf	InterPro:Prochl_reduct
KEGG:00860+1.3.1.33	PANTHER:PTHR44419	PANTHER:PTHR44419:SF3	SEG:seg	SUPFAM:SSF51735	UniParc:UPI0002964DD1
UniProt:M0U6F4	MapMan:35.1	:	:	:	:

Description

Putative Protochlorophyllide reductase B, chloroplastic [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG04920_001]

Coordinates

chrchrUn_random:+:19326339..19327519

Molecular Weight (calculated)

27337.0 Da

IEP (calculated)

11.219

GRAVY (calculated)

-0.287

Length

254 amino acids

Sequence
(BLAST)

001: MALEGSSFFS SALSAVHKEG KANGGVKDSA FFGISITDHM KSDMSLSQRP NVSVGVPRAQ AAVTTPAIKQ TTKGKKTIRK GNVVVTGASS GLGLATAKAL
101: AETIKWNVIM ACRDFLKAEK GRQVRRHVRR ELRGYAPRPR VVGQRPPVRE ELSAAIRNAA RWACLQCCGN TNTLAGNVSP NANLGDLREL AGGFNGLSSS
201: AMIDGGEFDG AKAFKDSKVC NTHHQRFREH IALFRLLPSL PKAKVHHQIR LAQV

Best Arabidopsis Sequence Match ( AT4G27440.1 )
(BLAST)

001: MALQAASLVS SAFSVRKDAK LNASSSSFKD SSLFGASITD QIKSEHGSSS LRFKREQSLR NLAIRAQTAA TSSPTVTKSV DGKKTLRKGN VVVTGASSGL
101: GLATAKALAE TGKWNVIMAC RDFLKAERAA KSVGMPKDSY TVMHLDLASL DSVRQFVDNF RRTETPLDVL VCNAAVYFPT AKEPTYSAEG FELSVATNHL
201: GHFLLARLLL DDLKKSDYPS KRLIIVGSIT GNTNTLAGNV PPKANLGDLR GLAGGLNGLN SSAMIDGGDF DGAKAYKDSK VCNMLTMQEF HRRFHEETGV
301: TFASLYPGCI ASTGLFREHI PLFRALFPPF QKYITKGYVS ETESGKRLAQ VVSDPSLTKS GVYWSWNNAS ASFENQLSEE ASDVEKARKV WEISEKLVGL
401: A

Arabidopsis Description

PORBProtochlorophyllide reductase B, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P21218]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.