Factsheet for GSMUA_Achr2P18620_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 1
cytosol 1
plastid 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_AchrUn_...	Banana	cytosol	71.52	72.2
VIT_16s0050g00760.t01	Wine grape	plastid	70.89	71.57
PGSC0003DMT400040845	Potato	cytosol	70.25	70.93
KRG91556	Soybean	cytosol	69.62	70.29
Solyc03g025410.2.1	Tomato	nucleus	69.3	69.97
VIT_02s0025g03380.t01	Wine grape	cytosol	68.99	69.21
KRH08894	Soybean	plastid	46.52	67.74
PGSC0003DMT400040848	Potato	plastid	67.09	67.73
Solyc03g025390.2.1	Tomato	cytosol	66.77	67.41
PGSC0003DMT400040847	Potato	cytosol	66.46	67.09
Solyc03g025370.2.1	Tomato	cytosol, nucleus, plastid	66.14	66.77
KRH38419	Soybean	plastid	67.41	66.77
KRH08897	Soybean	cytosol, mitochondrion	65.82	66.24
PGSC0003DMT400032133	Potato	cytosol	65.82	66.03
OQU92195	Sorghum	cytosol	65.82	66.03
KRH59919	Soybean	cytosol, plastid	65.82	66.03
KRH41194	Soybean	cytosol, plastid	65.82	66.03
KRH38432	Soybean	cytosol	66.46	65.83
EER91987	Sorghum	plastid	64.56	65.18
Solyc08g081200.2.1	Tomato	cytosol	64.87	65.08
TraesCS1B01G221200.1	Wheat	cytosol	64.56	64.76
Os10t0547900-01	Rice	cytosol	64.24	64.65
PGSC0003DMT400085601	Potato	plastid	32.91	64.6
Zm00001d047150_P003	Maize	plastid	64.24	64.44
TraesCS1D01G210800.1	Wheat	plastid	64.56	64.15
TraesCS1A01G207500.1	Wheat	cytosol	63.92	64.13
AT4G11410.1	Thale cress	cytosol, mitochondrion	64.24	64.04
Bra013690.1-P	Field mustard	plastid	65.51	63.89
CDY10884	Canola	plastid	64.87	63.66
KRH38426	Soybean	cytosol	65.51	63.5
KRH35271	Soybean	plastid	69.94	63.32
Os10t0548000-02	Rice	cytosol, peroxisome, plastid	63.92	63.32
Solyc03g025400.2.1	Tomato	cytosol	63.29	63.29
AT4G23430.2	Thale cress	plastid	64.24	63.04
CDY13264	Canola	cytosol	62.97	62.78
CDX86777	Canola	cytosol	62.97	62.78
Bra035220.1-P	Field mustard	cytosol	62.97	62.78
KRH08898	Soybean	cytosol	62.66	62.66
OQU92191	Sorghum	plastid	62.03	62.62
KRG91557	Soybean	cytosol	40.82	62.02
KRH35274	Soybean	cytosol, mitochondrion, plastid	70.25	61.84
KRH38433	Soybean	cytosol	62.34	61.76
AT4G23420.3	Thale cress	plastid	64.56	61.26
Bra020819.1-P	Field mustard	cytosol, plastid	62.34	61.18
CDX76338	Canola	cytosol, plastid	62.34	61.18
KRH38431	Soybean	plastid	62.03	60.68
Zm00001d029840_P003	Maize	plastid	63.92	60.48
Solyc08g008060.1.1	Tomato	cytosol	60.13	60.32
PGSC0003DMT400014810	Potato	mitochondrion	45.89	59.18
GSMUA_Achr8P20890_001	Banana	cytosol, mitochondrion, plastid	58.86	58.12
GSMUA_Achr11P...	Banana	cytosol	59.49	58.02
GSMUA_Achr10P...	Banana	cytosol, mitochondrion, plastid	58.54	57.63
CDY69917	Canola	endoplasmic reticulum	55.38	57.38
CDY44096	Canola	mitochondrion, plastid	65.19	57.06
GSMUA_Achr7P15240_001	Banana	plastid	58.23	56.79
GSMUA_Achr2P08080_001	Banana	mitochondrion	56.65	55.08
KRH08895	Soybean	cytosol	65.19	53.93
GSMUA_Achr11P...	Banana	cytosol	49.05	44.93
GSMUA_Achr8P11870_001	Banana	cytosol	46.84	43.53
GSMUA_Achr1P25440_001	Banana	cytosol	38.61	39.61
VIT_16s0050g00750.t01	Wine grape	plastid	72.47	36.64
GSMUA_Achr3P14270_001	Banana	plastid	32.28	26.36
GSMUA_Achr7P04280_001	Banana	plastid	32.91	26.13
GSMUA_Achr11P...	Banana	plastid	32.59	26.01
GSMUA_Achr3P22130_001	Banana	cytosol	54.43	24.43
GSMUA_Achr7P04190_001	Banana	cytosol	31.33	24.15
GSMUA_AchrUn_...	Banana	cytosol	13.29	16.54

Protein Annotations

EnsemblPlants:GSMUA_Achr2P18620_001	EnsemblPlants:GSMUA_Achr2T18620_001	EnsemblPlantsGene:GSMUA_Achr2G18620_001	Gene3D:3.40.50.720	InterPro:NAD(P)-bd_dom_sf	InterPro:SDR_fam
PANTHER:PTHR24320	PANTHER:PTHR24320:SF121	PFAM:PF00106	PRINTS:PR00080	PRINTS:PR00081	SEG:seg
SUPFAM:SSF51735	UniParc:UPI0002957417	UniProt:M0S953	MapMan:23.1.3.5.1	:	:

Description

Putative WW domain-containing oxidoreductase [Source:GMGC_GENE;Acc:GSMUA_Achr2G18620_001]

Coordinates

chr2:+:18982758..18988218

Molecular Weight (calculated)

34185.2 Da

IEP (calculated)

9.146

GRAVY (calculated)

0.014

Length

316 amino acids

Sequence
(BLAST)

001: MWPFHRRGPS GFSSSSTAEE VTEGLDGSGL TAIVTGASSG IGTETARVLA LRGVHVVMGV RNLSAGHNVK EAIIKDIPTA KVDVLELDLS SMASVKKFTS
101: QFGALNLPLN ILINNAGIMA TPFMCSHDGI ELQFATNHIG HFLLTHLLLE KMKNTTRSCN VEGRIVNVSS EGHRLTYLKG IRFDKINDKS GYYCYFAYGQ
201: SKLANILHTV ELSRRLKEEG VNITANSLHP GVIVTNLFRH HGFVNAILGT AGKLVTKNVH QGAATTCYVA LHPQVKGVTG KYFSNSNFAT PSSQTSDAYL
301: ASKLWDLSMD MISSCL

Best Arabidopsis Sequence Match ( AT4G11410.1 )
(BLAST)

001: MWPFWWKGAS GFSARSTAEE VTHGIDGTGL TAIVTGASSG IGEETTRVLA LRGVHVVMAV RNTDSGNQVR DKILKEIPQA KIDVMKLDLS SMASVRSFAS
101: EYQSLDLPLN LLINNAGIMA CPFLLSSDNI ELQFATNHLG HFLLTNLLLE RMKKTASESN REGRIVIVSS EGHRFAYREG VQFDKINDEA RYNTLQAYGQ
201: SKLGNILHAT ELARLFKEQG VNITANSLHP GSIMTNLLRY HSFINTIGNA VGKYVLKSIP QGAATTCYAA LHPQAKGVSG EYLMDNNISD PNSQGKDKDL
301: AKKLWEFSLR LTGEEES

Arabidopsis Description

NAD(P)-binding Rossmann-fold superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LDY7]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.