CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 1
plastid 3
mitochondrion 2
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH59919	Soybean	cytosol, plastid	96.83	96.83
VIT_02s0025g03380.t01	Wine grape	cytosol	75.24	75.24
CDY13264	Canola	cytosol	73.97	73.5
Bra035220.1-P	Field mustard	cytosol	73.33	72.87
CDX86777	Canola	cytosol	73.33	72.87
AT4G11410.1	Thale cress	cytosol, mitochondrion	73.02	72.56
KRG91556	Soybean	cytosol	71.75	72.2
PGSC0003DMT400032133	Potato	cytosol	71.75	71.75
Solyc08g081200.2.1	Tomato	cytosol	71.43	71.43
GSMUA_AchrUn_...	Banana	cytosol	70.48	70.93
CDY10884	Canola	plastid	70.48	68.94
Bra013690.1-P	Field mustard	plastid	70.16	68.21
KRH08894	Soybean	plastid	46.98	68.2
EER96376	Sorghum	mitochondrion, plastid	68.25	68.04
AT4G23430.2	Thale cress	plastid	69.52	68.01
KRH38432	Soybean	cytosol	67.94	67.08
Solyc08g008060.1.1	Tomato	cytosol	66.98	66.98
KRH08897	Soybean	cytosol, mitochondrion	66.67	66.88
Bra020819.1-P	Field mustard	cytosol, plastid	67.94	66.46
CDX76338	Canola	cytosol, plastid	67.94	66.46
KRH38419	Soybean	plastid	67.3	66.46
TraesCS4D01G003200.1	Wheat	golgi	66.67	66.46
KRH08898	Soybean	cytosol	66.67	66.46
KRH38433	Soybean	cytosol	66.98	66.14
GSMUA_Achr2P18620_001	Banana	plastid	66.03	65.82
TraesCS4A01G311400.1	Wheat	mitochondrion, plastid	66.03	65.82
TraesCS4B01G002900.1	Wheat	golgi	66.03	65.82
Os09t0570300-01	Rice	plasma membrane	65.71	65.51
TraesCS4D01G002700.2	Wheat	mitochondrion, plastid	65.4	65.4
PGSC0003DMT400014810	Potato	mitochondrion	50.48	64.9
TraesCS4B01G003400.1	Wheat	plastid	64.76	64.76
KRG91557	Soybean	cytosol	41.9	63.46
KRH38426	Soybean	cytosol	65.4	63.19
CDY69917	Canola	endoplasmic reticulum	60.95	62.95
AT4G23420.3	Thale cress	plastid	66.35	62.76
KRH35271	Soybean	plastid	69.21	62.46
TraesCS4D01G003400.2	Wheat	mitochondrion	63.81	62.42
KRH38431	Soybean	plastid	63.49	61.92
CDY44096	Canola	mitochondrion, plastid	70.48	61.5
KRH35274	Soybean	cytosol, mitochondrion, plastid	69.84	61.28
OQU92195	Sorghum	cytosol	61.27	61.27
OQU92191	Sorghum	plastid	60.32	60.7
EER91987	Sorghum	plastid	60.0	60.38
TraesCS1A01G207500.1	Wheat	cytosol	60.32	60.32
TraesCS1B01G221200.1	Wheat	cytosol	60.32	60.32
Zm00001d047150_P003	Maize	plastid	60.32	60.32
Zm00001d019754_P001	Maize	mitochondrion, plastid	66.03	58.92
TraesCS1D01G210800.1	Wheat	plastid	58.73	58.18
Os04t0291100-01	Rice	mitochondrion	57.78	57.96
Os10t0548000-02	Rice	cytosol, peroxisome, plastid	58.41	57.68
TraesCS5B01G461100.1	Wheat	mitochondrion, plastid	20.95	57.39
Os10t0547900-01	Rice	cytosol	57.14	57.32
Zm00001d029840_P003	Maize	plastid	60.0	56.59
Zm00001d025129_P001	Maize	mitochondrion	41.9	56.17
KRG95813	Soybean	nucleus	57.14	55.73
TraesCS4A01G492800.1	Wheat	mitochondrion, plastid	20.32	55.65
KRH08895	Soybean	cytosol	67.3	55.5
KRH67540	Soybean	nucleus	56.51	55.11
KRH32305	Soybean	plastid	56.19	54.8
TraesCS3B01G220800.1	Wheat	mitochondrion, plastid	20.0	54.78
KRH19708	Soybean	nucleus	54.92	53.56
KRH54355	Soybean	cytosol	46.03	43.94
KRH57109	Soybean	mitochondrion	45.71	42.73
KRH03249	Soybean	mitochondrion, plastid	45.08	42.14
KRH41377	Soybean	cytosol	43.81	40.95
KRH63592	Soybean	plastid	45.71	40.45
KRH55334	Soybean	plastid	33.97	26.82
KRH38907	Soybean	endoplasmic reticulum	31.43	26.19
KRH26074	Soybean	plastid	28.25	26.02
KRH09442	Soybean	cytosol	31.11	25.99
KRH27209	Soybean	nucleus, plastid	32.7	25.81

Protein Annotations

EMBL:ACUP02004753	EnsemblPlants:KRH41194	EnsemblPlantsGene:GLYMA_08G015400	EntrezGene:100785176	Gene3D:3.40.50.720	InterPro:NAD(P)-bd_dom_sf
InterPro:SDR_fam	PANTHER:PTHR24320	PANTHER:PTHR24320:SF146	PFAM:PF00106	PRINTS:PR00081	ProteinID:KRH41194
ProteinID:KRH41194.1	SEG:seg	SUPFAM:SSF51735	UniParc:UPI000233872C	UniProt:I1KPB6	MapMan:23.1.3.5.1

Description

hypothetical protein

Coordinates

chr8:+:1208299..1211229

Molecular Weight (calculated)

34448.2 Da

IEP (calculated)

7.079

GRAVY (calculated)

-0.071

Length

315 amino acids

Sequence
(BLAST)

001: MWFLGWKGQS GFSASSTAEQ VTQGIDGTAL TAIVTGATSG LGLETTRVLA LRSVHVVMAV RSVDSGKNVK ETILKEIPSA KIDVMELDLS SMASVRKFAA
101: DFNSSGLPLN ILINNAGVMA TPFTLSQDNI ELQFATNHLG HFLLTNLLLE TMKKTVRECN QEGRIVILSS EAHRFAYHEG IQFDKINDES GYSSYFAYGQ
201: SKLANILHAN ELARHLKEEG VEITVNSLHP GSIVTNILRY HDYINAVANM VGKYFLKNVQ QGAATQCYVA LHPQVKGISG EYFMDSNKGT PASLAKDSEL
301: AKKLWEFSLS LTNPK

Best Arabidopsis Sequence Match ( AT4G11410.1 )
(BLAST)

001: MWPFWWKGAS GFSARSTAEE VTHGIDGTGL TAIVTGASSG IGEETTRVLA LRGVHVVMAV RNTDSGNQVR DKILKEIPQA KIDVMKLDLS SMASVRSFAS
101: EYQSLDLPLN LLINNAGIMA CPFLLSSDNI ELQFATNHLG HFLLTNLLLE RMKKTASESN REGRIVIVSS EGHRFAYREG VQFDKINDEA RYNTLQAYGQ
201: SKLGNILHAT ELARLFKEQG VNITANSLHP GSIMTNLLRY HSFINTIGNA VGKYVLKSIP QGAATTCYAA LHPQAKGVSG EYLMDNNISD PNSQGKDKDL
301: AKKLWEFSLR LTGEEES

Arabidopsis Description

NAD(P)-binding Rossmann-fold superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9LDY7]
SUBAcon: [mitochondrion,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.