CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
cytosol 1
mitochondrion 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	plastid
MultiLoc:	cytosol
Predotar:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH52624
KRH61964

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G50130.1	KRH52624	AT5G39730.1	21798944
AT5G50130.1	KRH61964	AT5G39730.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH03249	Soybean	mitochondrion, plastid	94.96	94.96
KRH54355	Soybean	cytosol	83.09	84.85
KRH63592	Soybean	plastid	82.79	78.37
VIT_17s0000g08920.t01	Wine grape	cytosol	76.56	78.18
PGSC0003DMT400046811	Potato	plastid	71.51	72.81
AT5G50130.1	Thale cress	mitochondrion	71.22	70.8
PGSC0003DMT400069439	Potato	plastid	49.26	68.03
GSMUA_Achr1P25440_001	Banana	cytosol	60.83	66.56
Solyc03g112540.2.1	Tomato	endoplasmic reticulum	70.92	66.39
Solyc06g071610.1.1	Tomato	plastid	67.36	62.02
CDX71585	Canola	mitochondrion	57.27	56.93
KRH41377	Soybean	cytosol	49.85	49.85
KRH08898	Soybean	cytosol	45.4	48.42
KRH19708	Soybean	nucleus	45.99	47.99
KRH32305	Soybean	plastid	45.99	47.99
KRH08894	Soybean	plastid	30.86	47.93
KRH38426	Soybean	cytosol	45.99	47.55
KRG95813	Soybean	nucleus	45.4	47.37
KRG91556	Soybean	cytosol	43.92	47.28
KRH08897	Soybean	cytosol, mitochondrion	43.92	47.13
KRH67540	Soybean	nucleus	45.1	47.06
KRH38433	Soybean	cytosol	44.51	47.02
KRH59919	Soybean	cytosol, plastid	43.92	46.98
KRH38431	Soybean	plastid	44.81	46.75
KRH38419	Soybean	plastid	43.92	46.4
KRH38432	Soybean	cytosol	43.92	46.4
Bra037939.1-P	Field mustard	cytosol	67.95	46.08
KRH41194	Soybean	cytosol, plastid	42.73	45.71
KRG91557	Soybean	cytosol	26.41	42.79
KRH35271	Soybean	plastid	43.03	41.55
KRH35274	Soybean	cytosol, mitochondrion, plastid	43.92	41.23
KRH08895	Soybean	cytosol	43.92	38.74
CDY37755	Canola	mitochondrion, plastid	67.95	36.76
KRH09442	Soybean	cytosol	27.89	24.93
KRH38907	Soybean	endoplasmic reticulum	27.6	24.6
KRH27209	Soybean	nucleus, plastid	26.71	22.56
KRH55334	Soybean	plastid	26.11	22.06
KRH26074	Soybean	plastid	21.07	20.76

Protein Annotations

EMBL:ACUP02002812	EnsemblPlants:KRH57109	EnsemblPlantsGene:GLYMA_05G040100	EntrezGene:100776567	Gene3D:3.40.50.720	InterPro:NAD(P)-bd_dom_sf
InterPro:SDR_fam	PANTHER:PTHR24320	PANTHER:PTHR24320:SF120	PFAM:PF00106	PRINTS:PR00080	PRINTS:PR00081
ProteinID:KRH57109	ProteinID:KRH57109.1	SUPFAM:SSF51735	UniParc:UPI0006EDEE6C	UniProt:A0A0R0JY38	MapMan:35.1

Description

hypothetical protein

Coordinates

chr5:-:3566116..3569447

Molecular Weight (calculated)

36982.7 Da

IEP (calculated)

9.061

GRAVY (calculated)

-0.051

Length

337 amino acids

Sequence
(BLAST)

001: MKATLRYLAG LAGPSGFGSN STAEQVTEDC CSLLPSNLTA LITVVEFLIE GATSGIGAET ARVLAKRGVR VVIGARDLRK AKEVREKIQK ESPHAEVILL
101: EIDLSSFASV QRFCSEFLAL ELPLNILINN AGMYSQNLEF SEEKIEMTFA TNYLGHFLLT KMLLEKIIDT AKKTGIQGRI INVSSVIHSW VKRSCFSFND
201: MLCGKNYNGT RAYAQSKLAT ILHVKEVARQ LKERNANVTI NAVHPGIVKT GIIRAHKGLI TDSLFFIASK LLKSISQGAS TTCYVALSGQ TDGMSGKYFT
301: DCNESNCSSL ANDESEARKL WNDTHALLHK RLRQATN

Best Arabidopsis Sequence Match ( AT5G50130.1 )
(BLAST)

001: MKGTLRYLAG IAGPNGFGSR STAEQVTQHS FFPCSHLTAI ITGGTSGIGA ETARVLAKRG VRVVMAVRDM KKAEMVKERI IRENPEADII LFEIDLSSLS
101: SVARFCSQFL SQDLPLNILI NNAGVFSPNL EFSEEKIELT FATNFLGHYL LTEMLIEKMI DTAEKSGIEG RIINLSSVIH NWVKPDCFSF PKLLHPISRY
201: NGTRAYAQSK LATILHAKAL SKQLKDRNAN VTINAVHPGI VKTGIIRAHK GLFTDSLFLI ASKLLKSISQ GAATTCYVAL SNETKGLSGK YFADCNETNC
301: SDLANDEYVA LKLCTQSRAL IHDHLHEFQI HALPNLCFL

Arabidopsis Description

NAD(P)-binding Rossmann-fold superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q8RWK2]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.