CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plasma membrane 1
cytosol 3
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH52624	Soybean	cytosol	90.91	91.43
GSMUA_Achr9P14100_001	Banana	plastid	61.36	63.91
GSMUA_Achr8P24650_001	Banana	mitochondrion	54.55	63.58
PGSC0003DMT400038470	Potato	cytosol	60.23	62.35
Solyc08g006070.2.1	Tomato	cytosol	60.23	62.35
VIT_04s0008g02840.t01	Wine grape	extracellular, plastid	61.36	62.07
CDY20309	Canola	cytosol	51.7	59.87
Bra032099.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	52.84	59.62
CDY46146	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	52.27	58.97
PGSC0003DMT400076081	Potato	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	52.27	58.97
EER90333	Sorghum	plastid	59.09	57.46
AT2G24390.1	Thale cress	cytosol	49.43	57.24
Zm00001d014692_P001	Maize	plastid	57.39	55.19
Os02t0141000-01	Rice	cytosol	47.73	54.9
EES04498	Sorghum	plastid	46.02	52.94
Os06t0702700-01	Rice	cytosol	55.68	51.58
AT4G31310.2	Thale cress	cytosol	50.57	51.15
TraesCS7B01G316500.1	Wheat	plastid	52.84	50.82
Zm00001d015242_P002	Maize	plastid	43.18	49.67
Bra024014.1-P	Field mustard	cytosol	49.43	49.43
CDY13422	Canola	cytosol	49.43	49.43
CDX72301	Canola	cytosol	48.86	48.86
TraesCS6B01G141200.1	Wheat	plastid	44.32	48.75
TraesCS7D01G409600.2	Wheat	plastid	51.14	46.39
TraesCS7A01G416300.1	Wheat	plastid	51.14	45.45
HORVU6Hr1G020320.5	Barley	mitochondrion	46.02	41.75
TraesCS6D01G102200.1	Wheat	mitochondrion	45.45	41.67
TraesCS6A01G113100.1	Wheat	cytosol, extracellular, mitochondrion, plastid	44.89	40.93
TraesCS3A01G536600.1	Wheat	endoplasmic reticulum, extracellular	32.95	38.67
AT3G28950.1	Thale cress	cytosol	35.8	38.18
CDX86398	Canola	cytosol	35.23	38.04
Bra025368.1-P	Field mustard	cytosol	35.23	38.04
CDX86401	Canola	cytosol	34.66	36.31
Bra025365.1-P	Field mustard	cytosol	34.66	36.31
AT3G28940.1	Thale cress	cytosol	34.66	36.09
CDX74433	Canola	cytosol	33.52	35.54
AT5G39730.1	Thale cress	cytosol	34.66	35.47
CDY44423	Canola	cytosol	33.52	35.33
Bra033071.1-P	Field mustard	cytosol	33.52	35.33
AT3G28930.1	Thale cress	cytosol	34.09	35.29
CDX86400	Canola	cytosol	33.52	35.12
CDY56031	Canola	cytosol	32.95	34.94
CDY04047	Canola	cytosol, extracellular, plastid	32.95	34.73
CDY44424	Canola	cytosol	32.95	34.52
Bra025366.1-P	Field mustard	cytosol	32.95	34.52
Bra025367.1-P	Field mustard	cytosol	32.95	34.52
Bra033070.1-P	Field mustard	cytosol	32.95	34.52
CDY11660	Canola	cytosol	32.95	34.12
AT5G39720.1	Thale cress	cytosol	31.82	33.94
CDX86399	Canola	cytosol, nucleus, plastid	32.39	33.93
CDX67437	Canola	nucleus	32.39	33.73
Bra028440.1-P	Field mustard	nucleus	32.39	33.73
CDX74432	Canola	cytosol	32.39	33.53
Bra025649.1-P	Field mustard	cytosol	26.7	33.33
CDY56032	Canola	cytosol	31.82	32.94
CDY04046	Canola	cytosol	31.25	32.74
Bra025647.1-P	Field mustard	mitochondrion	28.41	27.78
CDX85232	Canola	cytosol	32.39	8.26

Protein Annotations

EMBL:ACUP02002203	EMBL:BT096471	EnsemblPlants:KRH61964	EnsemblPlantsGene:GLYMA_04G077500	EntrezGene:100794072	Gene3D:3.10.490.10
InterPro:AIG2-like	InterPro:GGCT-like	InterPro:GGCT-like_sf	PANTHER:PTHR31544	PANTHER:PTHR31544:SF3	PFAM:PF06094
ProteinID:KRH61964	ProteinID:KRH61964.1	SUPFAM:SSF110857	UniParc:UPI0001B1678E	UniProt:C6TFS9	MapMan:35.1

Description

hypothetical protein

Coordinates

chr4:+:6504742..6506850

Molecular Weight (calculated)

20193.0 Da

IEP (calculated)

4.802

GRAVY (calculated)

-0.453

Length

176 amino acids

Sequence
(BLAST)

001: MSVKLNCVGG GETHNVFVYG SLLADEVVHT LLKRVPPTAP AILHDYHRFK IKGRVYPAIL PVQNNKVNGR VLLGISGVEL DILDEFEDVE YTRTDVEVSL
101: KDKSEKLQVC AYVWSNPNDP NLNAEWDFEE WKQVHLNDFV KMTGGFMQEL ELPESKPRVQ TYETFYKQEN DKPLEP

Best Arabidopsis Sequence Match ( AT4G31310.2 )
(BLAST)

001: MSMLSGKAAY DLFVYGSLQE PEVVYVLLNR VPDHVSAVLS GFHRFRLKGR VYPTILPDGT GKVNGKVLKG ITDDELKMLD EFEDVEYDRK TVEVMLTDTS
101: EKLQVETYVW KNKDDPDLYG EWDFEEWRQH DKEDFVTATK KFLENRRLPE AKTRMDTFKT FFKQDLENGK PLDS

Arabidopsis Description

AIG2-like (avirulence induced gene) family protein [Source:TAIR;Acc:AT4G31310]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.