Factsheet for Solyc08g006070.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
plastid 2
cytosol 3
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	nucleus
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	cytosol, nucleus
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400038470	Potato	cytosol	94.71	94.71
GSMUA_Achr8P24650_001	Banana	mitochondrion	57.06	64.24
GSMUA_Achr9P14100_001	Banana	plastid	60.0	60.35
KRH61964	Soybean	cytosol	62.35	60.23
VIT_04s0008g02840.t01	Wine grape	extracellular, plastid	61.18	59.77
KRH52624	Soybean	cytosol	61.18	59.43
AT2G24390.1	Thale cress	cytosol	52.94	59.21
CDY20309	Canola	cytosol	52.94	59.21
Bra032099.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	53.53	58.33
CDY46146	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	52.94	57.69
EER90333	Sorghum	plastid	57.65	54.14
Os02t0141000-01	Rice	cytosol	48.24	53.59
Zm00001d014692_P001	Maize	plastid	57.06	53.01
TraesCS6B01G141200.1	Wheat	plastid	48.82	51.88
AT4G31310.2	Thale cress	cytosol	52.94	51.72
TraesCS7B01G316500.1	Wheat	plastid	55.29	51.37
EES04498	Sorghum	plastid	44.71	49.67
Os06t0702700-01	Rice	cytosol	54.71	48.95
CDX72301	Canola	cytosol	50.0	48.3
TraesCS7D01G409600.2	Wheat	plastid	54.71	47.94
CDY13422	Canola	cytosol	48.82	47.16
Bra024014.1-P	Field mustard	cytosol	48.82	47.16
TraesCS7A01G416300.1	Wheat	plastid	54.71	46.97
Zm00001d015242_P002	Maize	plastid	41.18	45.75
HORVU6Hr1G020320.5	Barley	mitochondrion	49.41	43.3
TraesCS6A01G113100.1	Wheat	cytosol, extracellular, mitochondrion, plastid	48.82	43.01
TraesCS6D01G102200.1	Wheat	mitochondrion	48.24	42.71
CDX86398	Canola	cytosol	38.82	40.49
Bra025368.1-P	Field mustard	cytosol	38.82	40.49
AT5G39730.1	Thale cress	cytosol	40.0	39.53
Bra033071.1-P	Field mustard	cytosol	38.82	39.52
CDY44423	Canola	cytosol	38.82	39.52
CDX67437	Canola	nucleus	38.82	39.05
Bra028440.1-P	Field mustard	nucleus	38.82	39.05
CDY04047	Canola	cytosol, extracellular, plastid	38.24	38.92
CDY11660	Canola	cytosol	38.82	38.82
AT3G28950.1	Thale cress	cytosol	37.06	38.18
AT5G39720.1	Thale cress	cytosol	37.06	38.18
TraesCS3A01G536600.1	Wheat	endoplasmic reticulum, extracellular	33.53	38.0
CDX74432	Canola	cytosol	37.65	37.65
CDX86401	Canola	cytosol	37.06	37.5
Bra025365.1-P	Field mustard	cytosol	37.06	37.5
CDX74433	Canola	cytosol	36.47	37.35
CDY56031	Canola	cytosol	36.47	37.35
AT3G28940.1	Thale cress	cytosol	37.06	37.28
CDY56032	Canola	cytosol	37.06	37.06
CDX86400	Canola	cytosol	36.47	36.9
Bra025366.1-P	Field mustard	cytosol	36.47	36.9
Bra025649.1-P	Field mustard	cytosol	30.59	36.88
Bra033070.1-P	Field mustard	cytosol	35.88	36.31
CDY44424	Canola	cytosol	35.88	36.31
AT3G28930.1	Thale cress	cytosol	35.88	35.88
CDX86399	Canola	cytosol, nucleus, plastid	35.29	35.71
Bra025367.1-P	Field mustard	cytosol	34.71	35.12
CDY04046	Canola	cytosol	34.71	35.12
Bra025647.1-P	Field mustard	mitochondrion	32.35	30.56
CDX85232	Canola	cytosol	35.88	8.84

Protein Annotations

EnsemblPlants:Solyc08g006070.2.1	EnsemblPlantsGene:Solyc08g006070.2	Gene3D:3.10.490.10	InterPro:AIG2-like	InterPro:GGCT-like	InterPro:GGCT-like_sf
PANTHER:PTHR31544	PANTHER:PTHR31544:SF3	PFAM:PF06094	SUPFAM:SSF110857	UniParc:UPI000276BC69	UniProt:K4CI96
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chr8:+:825105..830426

Molecular Weight (calculated)

19663.3 Da

IEP (calculated)

4.693

GRAVY (calculated)

-0.394

Length

170 amino acids

Sequence
(BLAST)

001: MASSSQSVFN VFVYGSLLAD DIVRALLKRV PPSNPAILHN YHRFSIKGRV YPAILPVENK RVNGKVLLDI NVPELNILDA FEDVEYERTT VDVSLMDSSK
101: TLQVETYVWV NKRDPDLHGE WDFEEWKVLH KGDFLTMTME FSEEMELPES KTRVATYESF YAQEENKSKP

Best Arabidopsis Sequence Match ( AT4G31310.2 )
(BLAST)

001: MSMLSGKAAY DLFVYGSLQE PEVVYVLLNR VPDHVSAVLS GFHRFRLKGR VYPTILPDGT GKVNGKVLKG ITDDELKMLD EFEDVEYDRK TVEVMLTDTS
101: EKLQVETYVW KNKDDPDLYG EWDFEEWRQH DKEDFVTATK KFLENRRLPE AKTRMDTFKT FFKQDLENGK PLDS

Arabidopsis Description

AIG2-like (avirulence induced gene) family protein [Source:TAIR;Acc:AT4G31310]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.