Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra025649.1-P | Field mustard | cytosol | 84.94 | 100.0 |
| CDY56031 | Canola | cytosol | 97.59 | 97.59 |
| CDX67437 | Canola | nucleus | 78.31 | 76.92 |
| CDY11660 | Canola | cytosol | 78.31 | 76.47 |
| AT5G39730.1 | Thale cress | cytosol | 75.3 | 72.67 |
| CDX74432 | Canola | cytosol | 72.29 | 70.59 |
| CDY56032 | Canola | cytosol | 71.69 | 70.0 |
| CDY04047 | Canola | cytosol, extracellular, plastid | 59.04 | 58.68 |
| CDY44423 | Canola | cytosol | 58.43 | 58.08 |
| CDX86399 | Canola | cytosol, nucleus, plastid | 55.42 | 54.76 |
| CDY44424 | Canola | cytosol | 55.42 | 54.76 |
| CDX86401 | Canola | cytosol | 54.82 | 54.17 |
| CDY04046 | Canola | cytosol | 54.82 | 54.17 |
| CDX86398 | Canola | cytosol | 52.41 | 53.37 |
| CDX86400 | Canola | cytosol | 53.01 | 52.38 |
| CDY46146 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 40.36 | 42.95 |
| CDY20309 | Canola | cytosol | 37.95 | 41.45 |
| GSMUA_Achr8P24650_001 | Banana | mitochondrion | 37.35 | 41.06 |
| CDX72301 | Canola | cytosol | 42.77 | 40.34 |
| CDY13422 | Canola | cytosol | 42.17 | 39.77 |
| Zm00001d015242_P002 | Maize | plastid | 36.14 | 39.22 |
| Os02t0141000-01 | Rice | cytosol | 36.14 | 39.22 |
| GSMUA_Achr9P14100_001 | Banana | plastid | 37.95 | 37.28 |
| PGSC0003DMT400076081 | Potato | endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole | 34.94 | 37.18 |
| PGSC0003DMT400038470 | Potato | cytosol | 37.95 | 37.06 |
| EES04498 | Sorghum | plastid | 33.73 | 36.6 |
| Solyc08g006070.2.1 | Tomato | cytosol | 37.35 | 36.47 |
| VIT_04s0008g02840.t01 | Wine grape | extracellular, plastid | 36.75 | 35.06 |
| Zm00001d014692_P001 | Maize | plastid | 38.55 | 34.97 |
| TraesCS7B01G316500.1 | Wheat | plastid | 37.95 | 34.43 |
| TraesCS6B01G141200.1 | Wheat | plastid | 33.13 | 34.38 |
| EER90333 | Sorghum | plastid | 37.35 | 34.25 |
| KRH61964 | Soybean | cytosol | 35.54 | 33.52 |
| Os06t0702700-01 | Rice | cytosol | 37.95 | 33.16 |
| KRH52624 | Soybean | cytosol | 34.94 | 33.14 |
| TraesCS7D01G409600.2 | Wheat | plastid | 37.35 | 31.96 |
| TraesCS7A01G416300.1 | Wheat | plastid | 37.35 | 31.31 |
| TraesCS6D01G102200.1 | Wheat | mitochondrion | 33.73 | 29.17 |
| HORVU6Hr1G020320.5 | Barley | mitochondrion | 33.73 | 28.87 |
| TraesCS3A01G536600.1 | Wheat | endoplasmic reticulum, extracellular | 25.9 | 28.67 |
| TraesCS6A01G113100.1 | Wheat | cytosol, extracellular, mitochondrion, plastid | 33.13 | 28.5 |
| CDX85232 | Canola | cytosol | 54.22 | 13.04 |
Protein Annotations
| EnsemblPlants:CDX74433 | EnsemblPlantsGene:GSBRNA2T00114292001 | Gene3D:3.10.490.10 | InterPro:AIG2-like | InterPro:GGCT-like | InterPro:GGCT-like_sf |
| PANTHER:PTHR31544 | PFAM:PF06094 | ProteinID:CDX74433 | ProteinID:CDX74433.1 | SUPFAM:SSF110857 | UniParc:UPI0004EF34CC |
| MapMan:35.1 | : | : | : | : | : |
Description
BnaA04g09560D
Coordinates
chrLK031801:-:239513..240676
Molecular Weight (calculated)
19260.8 Da
IEP (calculated)
4.756
GRAVY (calculated)
-0.636
Length
166 amino acids
Sequence
(BLAST)
(BLAST)
001: MSGSGTQLHN VFVYGSFQEP EVVKVMLDRT PEIISVTLPG FKRFRLKGRL YPCVIPSEDG EVHGKLLMGL TDEELENVDA VEGNEYERVT VGVVREDNSE
101: KMTVKTYIWI NKDDPDIDGE WDFEEWKQLH MKKFIETFKE IMEWKRNPHG KGRDDFNHVL RDAPSA
101: KMTVKTYIWI NKDDPDIDGE WDFEEWKQLH MKKFIETFKE IMEWKRNPHG KGRDDFNHVL RDAPSA
001: MCSSDSLQLH NVFVYGSFQD PDVINVMLDR TPEIVSATLP GFQRFRLKGR LYPCIVPSEK GEVHGKVLMG VTSDELENLD AVEGNEYERV TVGIVREDNS
101: EKMAVKTYMW INKADPDMFG EWNFEEWKRL HKKKFIETFK KIMECKKKPQ GQGNDDISHV LREDQ
101: EKMAVKTYMW INKADPDMFG EWNFEEWKRL HKKKFIETFK KIMECKKKPQ GQGNDDISHV LREDQ
Arabidopsis Description
AIG2LAAt5g39720 [Source:UniProtKB/TrEMBL;Acc:A2RVP6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.