CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 4
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH61964	Soybean	cytosol	91.43	90.91
GSMUA_Achr9P14100_001	Banana	plastid	61.14	63.31
VIT_04s0008g02840.t01	Wine grape	extracellular, plastid	62.29	62.64
GSMUA_Achr8P24650_001	Banana	mitochondrion	53.71	62.25
PGSC0003DMT400038470	Potato	cytosol	59.43	61.18
Solyc08g006070.2.1	Tomato	cytosol	59.43	61.18
CDY20309	Canola	cytosol	52.0	59.87
Bra032099.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	53.14	59.62
CDY46146	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	52.57	58.97
PGSC0003DMT400076081	Potato	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	51.43	57.69
EER90333	Sorghum	plastid	59.43	57.46
AT2G24390.1	Thale cress	cytosol	49.71	57.24
Zm00001d014692_P001	Maize	plastid	57.71	55.19
Os02t0141000-01	Rice	cytosol	46.86	53.59
Os06t0702700-01	Rice	cytosol	57.14	52.63
EES04498	Sorghum	plastid	45.14	51.63
TraesCS7B01G316500.1	Wheat	plastid	53.14	50.82
AT4G31310.2	Thale cress	cytosol	50.29	50.57
Zm00001d015242_P002	Maize	plastid	42.29	48.37
Bra024014.1-P	Field mustard	cytosol	48.57	48.3
CDY13422	Canola	cytosol	48.57	48.3
CDX72301	Canola	cytosol	48.0	47.73
TraesCS6B01G141200.1	Wheat	plastid	43.43	47.5
TraesCS7D01G409600.2	Wheat	plastid	51.43	46.39
TraesCS7A01G416300.1	Wheat	plastid	51.43	45.45
TraesCS6D01G102200.1	Wheat	mitochondrion	45.14	41.15
HORVU6Hr1G020320.5	Barley	mitochondrion	45.14	40.72
TraesCS6A01G113100.1	Wheat	cytosol, extracellular, mitochondrion, plastid	44.0	39.9
Bra025368.1-P	Field mustard	cytosol	35.43	38.04
CDX86398	Canola	cytosol	35.43	38.04
TraesCS3A01G536600.1	Wheat	endoplasmic reticulum, extracellular	32.57	38.0
AT3G28950.1	Thale cress	cytosol	35.43	37.58
Bra025365.1-P	Field mustard	cytosol	34.86	36.31
CDX86401	Canola	cytosol	34.86	36.31
AT3G28940.1	Thale cress	cytosol	34.86	36.09
Bra025366.1-P	Field mustard	cytosol	34.29	35.71
CDY44423	Canola	cytosol	33.71	35.33
Bra033071.1-P	Field mustard	cytosol	33.71	35.33
Bra025367.1-P	Field mustard	cytosol	33.71	35.12
CDX86400	Canola	cytosol	33.71	35.12
CDX74433	Canola	cytosol	33.14	34.94
AT5G39730.1	Thale cress	cytosol	34.29	34.88
CDY04047	Canola	cytosol, extracellular, plastid	33.14	34.73
AT3G28930.1	Thale cress	cytosol	33.71	34.71
CDY44424	Canola	cytosol	33.14	34.52
CDX86399	Canola	cytosol, nucleus, plastid	33.14	34.52
Bra033070.1-P	Field mustard	cytosol	33.14	34.52
CDY56031	Canola	cytosol	32.57	34.34
CDX74432	Canola	cytosol	33.14	34.12
AT5G39720.1	Thale cress	cytosol	32.0	33.94
CDY56032	Canola	cytosol	32.57	33.53
CDY04046	Canola	cytosol	32.0	33.33
CDY11660	Canola	cytosol	32.0	32.94
Bra025649.1-P	Field mustard	cytosol	26.29	32.62
CDX67437	Canola	nucleus	31.43	32.54
Bra028440.1-P	Field mustard	nucleus	31.43	32.54
Bra025647.1-P	Field mustard	mitochondrion	29.14	28.33
CDX85232	Canola	cytosol	32.57	8.26

Protein Annotations

EMBL:ACUP02003425	EMBL:BT092368	EnsemblPlants:KRH52624	EnsemblPlantsGene:GLYMA_06G078600	EntrezGene:100527521	Gene3D:3.10.490.10
InterPro:AIG2-like	InterPro:GGCT-like	InterPro:GGCT-like_sf	PANTHER:PTHR31544	PANTHER:PTHR31544:SF3	PFAM:PF06094
ProteinID:KRH52624	ProteinID:KRH52624.1	SUPFAM:SSF110857	UniParc:UPI0001B159E7	UniProt:C6T4K7	MapMan:35.1

Description

hypothetical protein

Coordinates

chr6:+:6077874..6080109

Molecular Weight (calculated)

20306.1 Da

IEP (calculated)

4.930

GRAVY (calculated)

-0.491

Length

175 amino acids

Sequence
(BLAST)

001: MSVKVNCVGG DTHNVFVYGS LLADEVVHTL LKRVPPTAPA ILHDYHRFKI KGRVYPAILP VQNNKVYGRV LLGISGVELD ILDEFEDVEY TRTDVEVSLK
101: DKSEKLQVCA YVWSNPNDPN LYAEWNFEEW KQVHMNDFVK MTDGFRQELE LPESKPRVQT YETFYKQEND KPLEP

Best Arabidopsis Sequence Match ( AT2G24390.1 )
(BLAST)

001: MSGTVTMHSV FVYGSLMADD VVRLLLNRIP QTASATLPDF HRFSIKGRVY PAIIPAKSDK VSGKVLFGIT DDELNVLDEF EDVEYERENV QVLLTDSSDE
101: KLQTKTYVWA KKDDPDLYGT WDFEEWKQLH MEGFLKMTKE FAEELNLPKS EI

Arabidopsis Description

AIG2LDAIG2-like protein D [Source:UniProtKB/Swiss-Prot;Acc:A8MRP2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.