Factsheet for VIT_04s0008g02840.t01

Subcellular Localization

min:

: max

Winner_takes_all: plastid, extracellular

Predictor Summary:

nucleus 3
plastid 4
cytosol 2
extracellular 3
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plastid
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	nucleus
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	cytosol, nucleus, plastid
Predotar:	plastid
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P24650_001	Banana	mitochondrion	56.32	64.9
PGSC0003DMT400038470	Potato	cytosol	60.92	62.35
KRH52624	Soybean	cytosol	62.64	62.29
PGSC0003DMT400076081	Potato	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	55.75	62.18
GSMUA_Achr9P14100_001	Banana	plastid	59.77	61.54
KRH61964	Soybean	cytosol	62.07	61.36
AT2G24390.1	Thale cress	cytosol	53.45	61.18
Solyc08g006070.2.1	Tomato	cytosol	59.77	61.18
Bra032099.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	53.45	59.62
Os02t0141000-01	Rice	cytosol	52.3	59.48
CDY20309	Canola	cytosol	51.72	59.21
CDY46146	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	52.87	58.97
EER90333	Sorghum	plastid	57.47	55.25
Zm00001d014692_P001	Maize	plastid	57.47	54.64
AT4G31310.2	Thale cress	cytosol	52.87	52.87
CDX72301	Canola	cytosol	53.45	52.84
CDY13422	Canola	cytosol	52.87	52.27
Bra024014.1-P	Field mustard	cytosol	52.87	52.27
TraesCS6B01G141200.1	Wheat	plastid	47.13	51.25
EES04498	Sorghum	plastid	44.25	50.33
TraesCS7B01G316500.1	Wheat	plastid	52.87	50.27
Os06t0702700-01	Rice	cytosol	54.02	49.47
Zm00001d015242_P002	Maize	plastid	43.1	49.02
TraesCS7D01G409600.2	Wheat	plastid	52.3	46.91
TraesCS7A01G416300.1	Wheat	plastid	51.72	45.45
TraesCS6D01G102200.1	Wheat	mitochondrion	47.13	42.71
HORVU6Hr1G020320.5	Barley	mitochondrion	47.13	42.27
TraesCS6A01G113100.1	Wheat	cytosol, extracellular, mitochondrion, plastid	46.55	41.97
AT3G28930.1	Thale cress	cytosol	37.93	38.82
TraesCS3A01G536600.1	Wheat	endoplasmic reticulum, extracellular	33.33	38.67
Bra028440.1-P	Field mustard	nucleus	37.36	38.46
CDX67437	Canola	nucleus	37.36	38.46
CDY11660	Canola	cytosol	37.36	38.24
Bra025365.1-P	Field mustard	cytosol	36.78	38.1
CDX86401	Canola	cytosol	36.78	38.1
AT3G28940.1	Thale cress	cytosol	36.78	37.87
AT5G39720.1	Thale cress	cytosol	35.63	37.58
AT3G28950.1	Thale cress	cytosol	35.63	37.58
CDY44424	Canola	cytosol	36.21	37.5
Bra033070.1-P	Field mustard	cytosol	36.21	37.5
AT5G39730.1	Thale cress	cytosol	36.78	37.21
CDY04046	Canola	cytosol	35.63	36.9
Bra025367.1-P	Field mustard	cytosol	35.63	36.9
CDX86399	Canola	cytosol, nucleus, plastid	35.63	36.9
CDX86398	Canola	cytosol	34.48	36.81
Bra025368.1-P	Field mustard	cytosol	34.48	36.81
CDY56031	Canola	cytosol	35.06	36.75
CDX74433	Canola	cytosol	35.06	36.75
Bra033071.1-P	Field mustard	cytosol	35.06	36.53
CDY04047	Canola	cytosol, extracellular, plastid	35.06	36.53
CDY44423	Canola	cytosol	35.06	36.53
CDX74432	Canola	cytosol	35.63	36.47
CDY56032	Canola	cytosol	35.06	35.88
CDX86400	Canola	cytosol	34.48	35.71
Bra025366.1-P	Field mustard	cytosol	33.91	35.12
Bra025649.1-P	Field mustard	cytosol	27.59	34.04
Bra025647.1-P	Field mustard	mitochondrion	31.61	30.56
CDX85232	Canola	cytosol	35.06	8.84

Protein Annotations

EntrezGene:100244120	wikigene:100244120	Gene3D:3.10.490.10	MapMan:35.1	InterPro:AIG2-like	ProteinID:CBI20800
ProteinID:CBI20800.3	UniProt:D7SU51	EMBL:FN595231	InterPro:GGCT-like	InterPro:GGCT-like_sf	EntrezGene:LOC100244120
wikigene:LOC100244120	PFAM:PF06094	PANTHER:PTHR31544	PANTHER:PTHR31544:SF3	SUPFAM:SSF110857	UniParc:UPI00015C8350
ArrayExpress:VIT_04s0008g02840	EnsemblPlantsGene:VIT_04s0008g02840	EnsemblPlants:VIT_04s0008g02840.t01	unigene:Vvi.12111	RefSeq:XP_002283189	RefSeq:XP_002283189.1

Description

No Description!

Coordinates

chr4:+:2362210..2365436

Molecular Weight (calculated)

19821.6 Da

IEP (calculated)

4.607

GRAVY (calculated)

-0.263

Length

174 amino acids

Sequence
(BLAST)

001: MAMASSAPQN LHAVFVYGSL LADEVVAVLL NRVPQSSAAV LHNFHRFSIK GRVYPAILPV ENKKVTGRVL LGVTDPELNI LDTFEDVEYD RRTVEVSLMD
101: GPEKLQAKTY VWRNSNDTNL YGDWDFEQWK GVHMENFVKM TMSFVEELEL PESMPRVTTY ETFFQQGSDN PPMS

Best Arabidopsis Sequence Match ( AT2G24390.1 )
(BLAST)

001: MSGTVTMHSV FVYGSLMADD VVRLLLNRIP QTASATLPDF HRFSIKGRVY PAIIPAKSDK VSGKVLFGIT DDELNVLDEF EDVEYERENV QVLLTDSSDE
101: KLQTKTYVWA KKDDPDLYGT WDFEEWKQLH MEGFLKMTKE FAEELNLPKS EI

Arabidopsis Description

AIG2LDAIG2-like protein D [Source:UniProtKB/Swiss-Prot;Acc:A8MRP2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.