Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G141200.1 | Wheat | plastid | 76.29 | 92.5 |
| TraesCS6A01G113100.1 | Wheat | cytosol, extracellular, mitochondrion, plastid | 78.35 | 78.76 |
| TraesCS6D01G102200.1 | Wheat | mitochondrion | 76.8 | 77.6 |
| Os02t0141000-01 | Rice | cytosol | 58.76 | 74.51 |
| EES04498 | Sorghum | plastid | 53.61 | 67.97 |
| Zm00001d015242_P002 | Maize | plastid | 52.06 | 66.01 |
| GSMUA_Achr8P24650_001 | Banana | mitochondrion | 51.03 | 65.56 |
| CDY20309 | Canola | cytosol | 46.91 | 59.87 |
| Bra032099.1-P | Field mustard | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 45.88 | 57.05 |
| CDY46146 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 45.36 | 56.41 |
| PGSC0003DMT400076081 | Potato | endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole | 43.81 | 54.49 |
| TraesCS3A01G536600.1 | Wheat | endoplasmic reticulum, extracellular | 41.75 | 54.0 |
| AT2G24390.1 | Thale cress | cytosol | 42.27 | 53.95 |
| Solyc08g006070.2.1 | Tomato | cytosol | 43.3 | 49.41 |
| PGSC0003DMT400038470 | Potato | cytosol | 42.78 | 48.82 |
| VIT_04s0008g02840.t01 | Wine grape | extracellular, plastid | 42.27 | 47.13 |
| KRH61964 | Soybean | cytosol | 41.75 | 46.02 |
| KRH52624 | Soybean | cytosol | 40.72 | 45.14 |
| AT4G31310.2 | Thale cress | cytosol | 38.66 | 43.1 |
| CDX72301 | Canola | cytosol | 38.14 | 42.05 |
| Bra024014.1-P | Field mustard | cytosol | 38.14 | 42.05 |
| CDY13422 | Canola | cytosol | 38.14 | 42.05 |
| CDY56031 | Canola | cytosol | 29.38 | 34.34 |
| CDX74433 | Canola | cytosol | 28.87 | 33.73 |
| CDX67437 | Canola | nucleus | 29.38 | 33.73 |
| Bra028440.1-P | Field mustard | nucleus | 29.38 | 33.73 |
| CDY11660 | Canola | cytosol | 29.38 | 33.53 |
| AT5G39720.1 | Thale cress | cytosol | 28.35 | 33.33 |
| CDX74432 | Canola | cytosol | 28.87 | 32.94 |
| Bra025649.1-P | Field mustard | cytosol | 23.71 | 32.62 |
| CDY56032 | Canola | cytosol | 28.35 | 32.35 |
| CDY04047 | Canola | cytosol, extracellular, plastid | 27.32 | 31.74 |
| CDX86398 | Canola | cytosol | 26.29 | 31.29 |
| Bra025368.1-P | Field mustard | cytosol | 26.29 | 31.29 |
| CDY44423 | Canola | cytosol | 26.8 | 31.14 |
| Bra033071.1-P | Field mustard | cytosol | 26.8 | 31.14 |
| CDX86399 | Canola | cytosol, nucleus, plastid | 26.8 | 30.95 |
| Bra025367.1-P | Field mustard | cytosol | 26.8 | 30.95 |
| CDX86400 | Canola | cytosol | 26.29 | 30.36 |
| CDY44424 | Canola | cytosol | 26.29 | 30.36 |
| Bra033070.1-P | Field mustard | cytosol | 26.29 | 30.36 |
| AT5G39730.1 | Thale cress | cytosol | 26.8 | 30.23 |
| Bra025366.1-P | Field mustard | cytosol | 25.77 | 29.76 |
| AT3G28950.1 | Thale cress | cytosol | 25.26 | 29.7 |
| CDX86401 | Canola | cytosol | 25.26 | 29.17 |
| Bra025365.1-P | Field mustard | cytosol | 25.26 | 29.17 |
| CDY04046 | Canola | cytosol | 24.74 | 28.57 |
| Bra025647.1-P | Field mustard | mitochondrion | 26.29 | 28.33 |
| AT3G28940.1 | Thale cress | cytosol | 24.23 | 27.81 |
| AT3G28930.1 | Thale cress | cytosol | 24.23 | 27.65 |
| CDX85232 | Canola | cytosol | 27.32 | 7.68 |
Protein Annotations
| EnsemblPlants:HORVU6Hr1G020320.5 | EnsemblPlantsGene:HORVU6Hr1G020320 | Gene3D:3.10.490.10 | InterPro:AIG2-like | InterPro:GGCT-like | InterPro:GGCT-like_sf |
| ncoils:Coil | PANTHER:PTHR31544 | PANTHER:PTHR31544:SF3 | PFAM:PF06094 | SEG:seg | SUPFAM:SSF110857 |
| UniParc:UPI000B471099 | UniProt:A0A287TIM4 | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chrchr6H:+:56978094..56979965
Molecular Weight (calculated)
21819.0 Da
IEP (calculated)
4.914
GRAVY (calculated)
-0.231
Length
194 amino acids
Sequence
(BLAST)
(BLAST)
001: CPCHRRLLSP RMASPPPPAP AAAAAHSVFV YGTLMAEEVV RVLLGRVPPS SPALLPNQYV RPRVPRSSLC APLSLFSRCF CRSQRFSIRG RVYPAILPVD
101: GSKVHGKVWK GITDGELDVL DIFEDEEYAR EAVGISLTDS ADTMIAYAYI WGNVDDPDLY GEWDFDEWKK VHLKDYLTMT QDFKEELEQL ESDT
101: GSKVHGKVWK GITDGELDVL DIFEDEEYAR EAVGISLTDS ADTMIAYAYI WGNVDDPDLY GEWDFDEWKK VHLKDYLTMT QDFKEELEQL ESDT
001: MSGTVTMHSV FVYGSLMADD VVRLLLNRIP QTASATLPDF HRFSIKGRVY PAIIPAKSDK VSGKVLFGIT DDELNVLDEF EDVEYERENV QVLLTDSSDE
101: KLQTKTYVWA KKDDPDLYGT WDFEEWKQLH MEGFLKMTKE FAEELNLPKS EI
101: KLQTKTYVWA KKDDPDLYGT WDFEEWKQLH MEGFLKMTKE FAEELNLPKS EI
Arabidopsis Description
AIG2LDAIG2-like protein D [Source:UniProtKB/Swiss-Prot;Acc:A8MRP2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.