Factsheet for PGSC0003DMT400076081

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, endoplasmic reticulum, vacuole, plastid, plasma membrane, golgi

Predictor Summary:

plastid 6
nucleus 1
cytosol 2
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid, secretory
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	plastid
EpiLoc:	nucleus
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	cytosol, plastid
Predotar:	secretory
PProwler:	plastid
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400038470	Potato	cytosol	73.72	67.65
GSMUA_Achr8P24650_001	Banana	mitochondrion	63.46	65.56
CDY20309	Canola	cytosol	58.97	60.53
Bra032099.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	60.26	60.26
CDY46146	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	59.62	59.62
GSMUA_Achr9P14100_001	Banana	plastid	63.46	58.58
AT2G24390.1	Thale cress	cytosol	55.77	57.24
VIT_04s0008g02840.t01	Wine grape	extracellular, plastid	62.18	55.75
Os02t0141000-01	Rice	cytosol	53.85	54.9
KRH61964	Soybean	cytosol	58.97	52.27
TraesCS6B01G141200.1	Wheat	plastid	53.21	51.88
KRH52624	Soybean	cytosol	57.69	51.43
EES04498	Sorghum	plastid	48.72	49.67
Zm00001d015242_P002	Maize	plastid	47.44	48.37
EER90333	Sorghum	plastid	55.77	48.07
Zm00001d014692_P001	Maize	plastid	54.49	46.45
Os06t0702700-01	Rice	cytosol	55.77	45.79
AT4G31310.2	Thale cress	cytosol	50.0	44.83
TraesCS7B01G316500.1	Wheat	plastid	52.56	44.81
HORVU6Hr1G020320.5	Barley	mitochondrion	54.49	43.81
TraesCS6A01G113100.1	Wheat	cytosol, extracellular, mitochondrion, plastid	53.85	43.52
TraesCS6D01G102200.1	Wheat	mitochondrion	53.21	43.23
CDX72301	Canola	cytosol	48.72	43.18
Bra024014.1-P	Field mustard	cytosol	48.08	42.61
CDY13422	Canola	cytosol	48.08	42.61
TraesCS7D01G409600.2	Wheat	plastid	52.56	42.27
TraesCS7A01G416300.1	Wheat	plastid	52.56	41.41
TraesCS3A01G536600.1	Wheat	endoplasmic reticulum, extracellular	37.82	39.33
CDY44423	Canola	cytosol	41.03	38.32
CDY04047	Canola	cytosol, extracellular, plastid	41.03	38.32
Bra033071.1-P	Field mustard	cytosol	41.03	38.32
CDY11660	Canola	cytosol	41.67	38.24
AT5G39720.1	Thale cress	cytosol	40.38	38.18
Bra028440.1-P	Field mustard	nucleus	41.03	37.87
CDX67437	Canola	nucleus	41.03	37.87
AT5G39730.1	Thale cress	cytosol	40.38	36.63
CDX86400	Canola	cytosol	39.1	36.31
CDX86399	Canola	cytosol, nucleus, plastid	39.1	36.31
Bra025366.1-P	Field mustard	cytosol	38.46	35.71
CDY44424	Canola	cytosol	38.46	35.71
Bra025367.1-P	Field mustard	cytosol	38.46	35.71
Bra033070.1-P	Field mustard	cytosol	38.46	35.71
CDY56031	Canola	cytosol	37.82	35.54
AT3G28940.1	Thale cress	cytosol	38.46	35.5
Bra025365.1-P	Field mustard	cytosol	37.82	35.12
CDX86401	Canola	cytosol	37.82	35.12
Bra025368.1-P	Field mustard	cytosol	36.54	34.97
CDX86398	Canola	cytosol	36.54	34.97
CDX74433	Canola	cytosol	37.18	34.94
CDX74432	Canola	cytosol	37.82	34.71
AT3G28950.1	Thale cress	cytosol	36.54	34.55
AT3G28930.1	Thale cress	cytosol	37.18	34.12
Bra025649.1-P	Field mustard	cytosol	30.77	34.04
CDY56032	Canola	cytosol	36.54	33.53
CDY04046	Canola	cytosol	35.9	33.33
Bra025647.1-P	Field mustard	mitochondrion	33.97	29.44
CDX85232	Canola	cytosol	41.03	9.28

Protein Annotations

EnsemblPlants:PGSC0003DMT400076081	EnsemblPlantsGene:PGSC0003DMG400029585	EntrezGene:102582997	Gene3D:3.10.490.10	InterPro:AIG2-like	InterPro:GGCT-like
InterPro:GGCT-like_sf	PANTHER:PTHR31544	PANTHER:PTHR31544:SF3	PFAM:PF06094	PGSC:PGSC0003DMG400029585	RefSeq:XP_006355207.1
SUPFAM:SSF110857	UniParc:UPI0002956291	UniProt:M1CW58	MapMan:35.1	:	:

Description

AIG2 [Source:PGSC_GENE;Acc:PGSC0003DMG400029585]

Coordinates

chr8:-:45007333..45010155

Molecular Weight (calculated)

17790.2 Da

IEP (calculated)

4.354

GRAVY (calculated)

-0.203

Length

156 amino acids

Sequence
(BLAST)

001: MASASNPQSL FNVFVYGSLL ADDVVRALLK RVPPSSPAIL HNFHRFSIKG CVYPAILPVE NKKVNGKVLS GITVPELDIL DKFEDVEYER KTVDVSLMDS
101: SDTLMVEAYI WADQSDPNLF GEWDFEEWER LHKQSFMKMT MEFLEELEQP NQSGSI

Best Arabidopsis Sequence Match ( AT2G24390.1 )
(BLAST)

001: MSGTVTMHSV FVYGSLMADD VVRLLLNRIP QTASATLPDF HRFSIKGRVY PAIIPAKSDK VSGKVLFGIT DDELNVLDEF EDVEYERENV QVLLTDSSDE
101: KLQTKTYVWA KKDDPDLYGT WDFEEWKQLH MEGFLKMTKE FAEELNLPKS EI

Arabidopsis Description

AIG2LDAIG2-like protein D [Source:UniProtKB/Swiss-Prot;Acc:A8MRP2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.