CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
nucleus 2
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra033071.1-P	Field mustard	cytosol	100.0	100.0
CDY04047	Canola	cytosol, extracellular, plastid	97.6	97.6
CDX86399	Canola	cytosol, nucleus, plastid	89.22	88.69
CDX86400	Canola	cytosol	84.43	83.93
CDX86401	Canola	cytosol	80.24	79.76
CDY44424	Canola	cytosol	78.44	77.98
CDY04046	Canola	cytosol	78.44	77.98
AT3G28930.1	Thale cress	cytosol	78.44	77.06
AT3G28940.1	Thale cress	cytosol	76.65	75.74
CDY56031	Canola	cytosol	58.08	58.43
CDX74433	Canola	cytosol	58.08	58.43
CDX86398	Canola	cytosol	56.89	58.28
CDY11660	Canola	cytosol	58.08	57.06
CDX67437	Canola	nucleus	56.89	56.21
CDX74432	Canola	cytosol	55.69	54.71
CDY56032	Canola	cytosol	55.69	54.71
CDX72301	Canola	cytosol	46.71	44.32
CDY13422	Canola	cytosol	46.11	43.75
CDY20309	Canola	cytosol	38.92	42.76
CDY46146	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	39.52	42.31
PGSC0003DMT400076081	Potato	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	38.32	41.03
GSMUA_Achr8P24650_001	Banana	mitochondrion	36.53	40.4
PGSC0003DMT400038470	Potato	cytosol	40.12	39.41
Solyc08g006070.2.1	Tomato	cytosol	39.52	38.82
Os02t0141000-01	Rice	cytosol	34.13	37.25
GSMUA_Achr9P14100_001	Banana	plastid	37.13	36.69
VIT_04s0008g02840.t01	Wine grape	extracellular, plastid	36.53	35.06
EER90333	Sorghum	plastid	37.72	34.81
Zm00001d015242_P002	Maize	plastid	31.74	34.64
TraesCS7B01G316500.1	Wheat	plastid	37.13	33.88
KRH52624	Soybean	cytosol	35.33	33.71
KRH61964	Soybean	cytosol	35.33	33.52
EES04498	Sorghum	plastid	30.54	33.33
Os06t0702700-01	Rice	cytosol	37.72	33.16
Zm00001d014692_P001	Maize	plastid	35.93	32.79
TraesCS7D01G409600.2	Wheat	plastid	37.13	31.96
TraesCS7A01G416300.1	Wheat	plastid	37.72	31.82
TraesCS6B01G141200.1	Wheat	plastid	29.94	31.25
TraesCS3A01G536600.1	Wheat	endoplasmic reticulum, extracellular	26.35	29.33
TraesCS6D01G102200.1	Wheat	mitochondrion	31.74	27.6
TraesCS6A01G113100.1	Wheat	cytosol, extracellular, mitochondrion, plastid	31.14	26.94
HORVU6Hr1G020320.5	Barley	mitochondrion	31.14	26.8
CDX85232	Canola	cytosol	87.43	21.16

Protein Annotations

EnsemblPlants:CDY44423	EnsemblPlantsGene:GSBRNA2T00080110001	Gene3D:3.10.490.10	InterPro:AIG2-like	InterPro:GGCT-like	InterPro:GGCT-like_sf
ncoils:Coil	PANTHER:PTHR31544	PFAM:PF06094	ProteinID:CDY44423	ProteinID:CDY44423.1	SUPFAM:SSF110857
UniParc:UPI0002546E60	UniProt:A0A078I5K3	MapMan:35.1	:	:	:

Description

BnaA02g29540DBnaA02g29540D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I5K3]

Coordinates

chrLK032588:+:204207..205620

Molecular Weight (calculated)

19164.8 Da

IEP (calculated)

4.943

GRAVY (calculated)

-0.410

Length

167 amino acids

Sequence
(BLAST)

001: MSSSESPSHN VFVYGSFQEP AVVGLILECT PVIVSAQLHG FHRYRLKGRL HPCIAPFETG VINGKVLTGL TNAQLENLDM IEGAEYERKT VEVVLTDTLE
101: KMQVEAFIWA NKDDPDMYGE WDFEEWKRLH MEKFIEASKK FIEWKKNPNG KTREEFAKFV NEDPPVA

Best Arabidopsis Sequence Match ( AT3G28930.3 )
(BLAST)

001: MTSSDQSPSH DVFVYGSFQE PAVVNLILEC APVMVSAQLH GYHLYRLKGR LHPCISPSDN GLINGKILTG LTDSQLESLD MIEGTEYVRK TVEVVLTDTL
101: EKKQVETIVW ANKDDPNMYG EWDFEEWKRL HMEKFIEAAT KFMEWKKNPN GRSREEFEKF VQDDSSPASA

Arabidopsis Description

AIG2AProtein AIG2 A [Source:UniProtKB/Swiss-Prot;Acc:P54121]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.