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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • cytosol 4
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX74432 Canola cytosol 97.65 97.65
Bra025647.1-P Field mustard mitochondrion 85.29 80.56
CDX74433 Canola cytosol 70.0 71.69
CDY56031 Canola cytosol 69.41 71.08
CDY11660 Canola cytosol 68.24 68.24
CDX67437 Canola nucleus 66.47 66.86
CDY04047 Canola cytosol, extracellular, plastid 55.29 56.29
CDY44423 Canola cytosol 54.71 55.69
CDY04046 Canola cytosol 52.94 53.57
CDX86399 Canola cytosol, nucleus, plastid 52.35 52.98
CDX86401 Canola cytosol 52.35 52.98
CDY44424 Canola cytosol 52.35 52.98
CDX86400 Canola cytosol 51.76 52.38
CDX86398 Canola cytosol 49.41 51.53
CDY46146 Canola cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 39.41 42.95
CDY20309 Canola cytosol 37.65 42.11
CDX72301 Canola cytosol 40.59 39.2
Os02t0141000-01 Rice cytosol 34.71 38.56
Zm00001d015242_P002 Maize plastid 34.71 38.56
GSMUA_Achr8P24650_001 Banana mitochondrion 34.12 38.41
CDY13422 Canola cytosol 39.41 38.07
Solyc08g006070.2.1 Tomato cytosol 37.06 37.06
PGSC0003DMT400038470 Potato cytosol 37.06 37.06
PGSC0003DMT400076081 Potato endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole 33.53 36.54
EES04498 Sorghum plastid 32.35 35.95
VIT_04s0008g02840.t01 Wine grape extracellular, plastid 35.88 35.06
GSMUA_Achr9P14100_001 Banana plastid 34.12 34.32
Zm00001d014692_P001 Maize plastid 36.47 33.88
TraesCS6B01G141200.1 Wheat plastid 31.18 33.12
EER90333 Sorghum plastid 34.71 32.6
KRH52624 Soybean cytosol 33.53 32.57
TraesCS7B01G316500.1 Wheat plastid 34.71 32.24
KRH61964 Soybean cytosol 32.94 31.82
TraesCS7D01G409600.2 Wheat plastid 34.71 30.41
Os06t0702700-01 Rice cytosol 33.53 30.0
TraesCS7A01G416300.1 Wheat plastid 34.71 29.8
TraesCS3A01G536600.1 Wheat endoplasmic reticulum, extracellular 25.29 28.67
HORVU6Hr1G020320.5 Barley mitochondrion 32.35 28.35
TraesCS6D01G102200.1 Wheat mitochondrion 31.18 27.6
TraesCS6A01G113100.1 Wheat cytosol, extracellular, mitochondrion, plastid 30.59 26.94
CDX85232 Canola cytosol 50.59 12.46
Protein Annotations
EnsemblPlants:CDY56032EnsemblPlantsGene:GSBRNA2T00017693001Gene3D:3.10.490.10InterPro:AIG2-likeInterPro:GGCT-likeInterPro:GGCT-like_sf
PANTHER:PTHR31544PFAM:PF06094ProteinID:CDY56032ProteinID:CDY56032.1SEG:segSUPFAM:SSF110857
UniParc:UPI0004EDD55EUniProt:A0A078J1X1MapMan:35.1:::
Description
BnaC04g55840DBnaC04g55840D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J1X1]
Coordinates
chrLK033449:+:27350..28255
Molecular Weight (calculated)
19683.7 Da
IEP (calculated)
5.346
GRAVY (calculated)
-0.493
Length
170 amino acids
Sequence
(BLAST)
001: MSRSDAQLHD VFVYGSFQEP DIVNIMLERT PEIISVTLPG FKRFRLKGRL YPCIVPSEAG EVHGKALMGL TDKELSNLDA VEGNEYEKVT VEVVRKENSA
101: KMIVKTYIWI NKNDPDMYGE WDFEEWKQLH MPKFMETIKE IIEINKNHPG KRVEDYTQIL HKNLGDAPLS
Best Arabidopsis Sequence Match ( AT5G39720.2 )
(BLAST)
001: MCSSDSLQLH NVFVYGSFQD PDVINVMLDR TPEIVSATLP GFQRFRLKGR LYPCIVPSEK GEVHGKVLMG VTSDELENLD AVEGNEYERV TVGIVREDNS
101: EKMAVKTYMW INKADPDMFG EWNFEV
Arabidopsis Description
AIG2LAAt5g39720 [Source:UniProtKB/TrEMBL;Acc:A2RVP6]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.