Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
CDX74432 | Canola | cytosol | 97.65 | 97.65 |
Bra025647.1-P | Field mustard | mitochondrion | 85.29 | 80.56 |
CDX74433 | Canola | cytosol | 70.0 | 71.69 |
CDY56031 | Canola | cytosol | 69.41 | 71.08 |
CDY11660 | Canola | cytosol | 68.24 | 68.24 |
CDX67437 | Canola | nucleus | 66.47 | 66.86 |
CDY04047 | Canola | cytosol, extracellular, plastid | 55.29 | 56.29 |
CDY44423 | Canola | cytosol | 54.71 | 55.69 |
CDY04046 | Canola | cytosol | 52.94 | 53.57 |
CDX86399 | Canola | cytosol, nucleus, plastid | 52.35 | 52.98 |
CDX86401 | Canola | cytosol | 52.35 | 52.98 |
CDY44424 | Canola | cytosol | 52.35 | 52.98 |
CDX86400 | Canola | cytosol | 51.76 | 52.38 |
CDX86398 | Canola | cytosol | 49.41 | 51.53 |
CDY46146 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 39.41 | 42.95 |
CDY20309 | Canola | cytosol | 37.65 | 42.11 |
CDX72301 | Canola | cytosol | 40.59 | 39.2 |
Os02t0141000-01 | Rice | cytosol | 34.71 | 38.56 |
Zm00001d015242_P002 | Maize | plastid | 34.71 | 38.56 |
GSMUA_Achr8P24650_001 | Banana | mitochondrion | 34.12 | 38.41 |
CDY13422 | Canola | cytosol | 39.41 | 38.07 |
Solyc08g006070.2.1 | Tomato | cytosol | 37.06 | 37.06 |
PGSC0003DMT400038470 | Potato | cytosol | 37.06 | 37.06 |
PGSC0003DMT400076081 | Potato | endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole | 33.53 | 36.54 |
EES04498 | Sorghum | plastid | 32.35 | 35.95 |
VIT_04s0008g02840.t01 | Wine grape | extracellular, plastid | 35.88 | 35.06 |
GSMUA_Achr9P14100_001 | Banana | plastid | 34.12 | 34.32 |
Zm00001d014692_P001 | Maize | plastid | 36.47 | 33.88 |
TraesCS6B01G141200.1 | Wheat | plastid | 31.18 | 33.12 |
EER90333 | Sorghum | plastid | 34.71 | 32.6 |
KRH52624 | Soybean | cytosol | 33.53 | 32.57 |
TraesCS7B01G316500.1 | Wheat | plastid | 34.71 | 32.24 |
KRH61964 | Soybean | cytosol | 32.94 | 31.82 |
TraesCS7D01G409600.2 | Wheat | plastid | 34.71 | 30.41 |
Os06t0702700-01 | Rice | cytosol | 33.53 | 30.0 |
TraesCS7A01G416300.1 | Wheat | plastid | 34.71 | 29.8 |
TraesCS3A01G536600.1 | Wheat | endoplasmic reticulum, extracellular | 25.29 | 28.67 |
HORVU6Hr1G020320.5 | Barley | mitochondrion | 32.35 | 28.35 |
TraesCS6D01G102200.1 | Wheat | mitochondrion | 31.18 | 27.6 |
TraesCS6A01G113100.1 | Wheat | cytosol, extracellular, mitochondrion, plastid | 30.59 | 26.94 |
CDX85232 | Canola | cytosol | 50.59 | 12.46 |
Protein Annotations
EnsemblPlants:CDY56032 | EnsemblPlantsGene:GSBRNA2T00017693001 | Gene3D:3.10.490.10 | InterPro:AIG2-like | InterPro:GGCT-like | InterPro:GGCT-like_sf |
PANTHER:PTHR31544 | PFAM:PF06094 | ProteinID:CDY56032 | ProteinID:CDY56032.1 | SEG:seg | SUPFAM:SSF110857 |
UniParc:UPI0004EDD55E | UniProt:A0A078J1X1 | MapMan:35.1 | : | : | : |
Description
BnaC04g55840DBnaC04g55840D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J1X1]
Coordinates
chrLK033449:+:27350..28255
Molecular Weight (calculated)
19683.7 Da
IEP (calculated)
5.346
GRAVY (calculated)
-0.493
Length
170 amino acids
Sequence
(BLAST)
(BLAST)
001: MSRSDAQLHD VFVYGSFQEP DIVNIMLERT PEIISVTLPG FKRFRLKGRL YPCIVPSEAG EVHGKALMGL TDKELSNLDA VEGNEYEKVT VEVVRKENSA
101: KMIVKTYIWI NKNDPDMYGE WDFEEWKQLH MPKFMETIKE IIEINKNHPG KRVEDYTQIL HKNLGDAPLS
101: KMIVKTYIWI NKNDPDMYGE WDFEEWKQLH MPKFMETIKE IIEINKNHPG KRVEDYTQIL HKNLGDAPLS
001: MCSSDSLQLH NVFVYGSFQD PDVINVMLDR TPEIVSATLP GFQRFRLKGR LYPCIVPSEK GEVHGKVLMG VTSDELENLD AVEGNEYERV TVGIVREDNS
101: EKMAVKTYMW INKADPDMFG EWNFEV
101: EKMAVKTYMW INKADPDMFG EWNFEV
Arabidopsis Description
AIG2LAAt5g39720 [Source:UniProtKB/TrEMBL;Acc:A2RVP6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.