CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY13422	Canola	cytosol	97.16	97.16
AT4G31310.2	Thale cress	cytosol	73.3	74.14
CDY20309	Canola	cytosol	48.86	56.58
CDY46146	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	48.86	55.13
GSMUA_Achr8P24650_001	Banana	mitochondrion	46.02	53.64
VIT_04s0008g02840.t01	Wine grape	extracellular, plastid	52.84	53.45
Os02t0141000-01	Rice	cytosol	45.45	52.29
Solyc08g006070.2.1	Tomato	cytosol	48.3	50.0
PGSC0003DMT400038470	Potato	cytosol	48.3	50.0
GSMUA_Achr9P14100_001	Banana	plastid	47.16	49.11
KRH61964	Soybean	cytosol	48.86	48.86
PGSC0003DMT400076081	Potato	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	43.18	48.72
KRH52624	Soybean	cytosol	47.73	48.0
CDY04047	Canola	cytosol, extracellular, plastid	44.32	46.71
CDY44423	Canola	cytosol	44.32	46.71
TraesCS6B01G141200.1	Wheat	plastid	41.48	45.62
EER90333	Sorghum	plastid	46.59	45.3
CDX86401	Canola	cytosol	43.18	45.24
CDX86399	Canola	cytosol, nucleus, plastid	42.61	44.64
EES04498	Sorghum	plastid	38.64	44.44
Zm00001d015242_P002	Maize	plastid	38.07	43.79
TraesCS7B01G316500.1	Wheat	plastid	45.45	43.72
CDY11660	Canola	cytosol	42.05	43.53
CDY44424	Canola	cytosol	41.48	43.45
CDY04046	Canola	cytosol	41.48	43.45
CDY56031	Canola	cytosol	40.91	43.37
Zm00001d014692_P001	Maize	plastid	44.89	43.17
CDX86400	Canola	cytosol	40.91	42.86
CDX74433	Canola	cytosol	40.34	42.77
CDX67437	Canola	nucleus	40.91	42.6
CDX86398	Canola	cytosol	39.2	42.33
Os06t0702700-01	Rice	cytosol	44.32	41.05
CDX74432	Canola	cytosol	39.2	40.59
CDY56032	Canola	cytosol	39.2	40.59
TraesCS7D01G409600.2	Wheat	plastid	44.32	40.21
TraesCS7A01G416300.1	Wheat	plastid	44.32	39.39
HORVU6Hr1G020320.5	Barley	mitochondrion	42.05	38.14
TraesCS3A01G536600.1	Wheat	endoplasmic reticulum, extracellular	32.39	38.0
TraesCS6A01G113100.1	Wheat	cytosol, extracellular, mitochondrion, plastid	41.48	37.82
TraesCS6D01G102200.1	Wheat	mitochondrion	40.91	37.5
CDX85232	Canola	cytosol	42.61	10.87

Protein Annotations

EnsemblPlants:CDX72301	EnsemblPlantsGene:GSBRNA2T00099783001	Gene3D:3.10.490.10	InterPro:AIG2-like	InterPro:GGCT-like	InterPro:GGCT-like_sf
PANTHER:PTHR31544	PANTHER:PTHR31544:SF3	PFAM:PF06094	ProteinID:CDX72301	ProteinID:CDX72301.1	SUPFAM:SSF110857
UniParc:UPI0004EE4AB2	MapMan:35.1	:	:	:	:

Description

BnaC07g43230D

Coordinates

chrLK031796:+:538446..539747

Molecular Weight (calculated)

20323.0 Da

IEP (calculated)

5.960

GRAVY (calculated)

-0.629

Length

176 amino acids

Sequence
(BLAST)

001: MSMLSGKAAG HDLFVYGSLQ DPHVVNVLLN RVPDHSSAVL SGFHRFKIKN RLYPTILPDS TGKVTGKVLK GITDDERKLL DDFEDVEYDR KAVEVVLTDT
101: SEKLQVGTYV WRNKVDPDLY GEWDFEEWKL HDREAFITAT KKFMEERKLP EAKTRIDTFK TFFKQDDTED GKPLHS

Best Arabidopsis Sequence Match ( AT4G31310.2 )
(BLAST)

001: MSMLSGKAAY DLFVYGSLQE PEVVYVLLNR VPDHVSAVLS GFHRFRLKGR VYPTILPDGT GKVNGKVLKG ITDDELKMLD EFEDVEYDRK TVEVMLTDTS
101: EKLQVETYVW KNKDDPDLYG EWDFEEWRQH DKEDFVTATK KFLENRRLPE AKTRMDTFKT FFKQDLENGK PLDS

Arabidopsis Description

AIG2-like (avirulence induced gene) family protein [Source:TAIR;Acc:AT4G31310]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.