Factsheet for TraesCS7D01G409600.2

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

cytosol 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 4
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	cytosol
iPSORT:	secretory
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G316500.1	Wheat	plastid	88.66	93.99
TraesCS7A01G416300.1	Wheat	plastid	95.36	93.43
Zm00001d014692_P001	Maize	plastid	68.04	72.13
Os06t0702700-01	Rice	cytosol	68.04	69.47
EER90333	Sorghum	plastid	64.43	69.06
GSMUA_Achr9P14100_001	Banana	plastid	55.15	63.31
Solyc08g006070.2.1	Tomato	cytosol	47.94	54.71
PGSC0003DMT400038470	Potato	cytosol	47.42	54.12
AT2G24390.1	Thale cress	cytosol	42.27	53.95
PGSC0003DMT400076081	Potato	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	42.27	52.56
VIT_04s0008g02840.t01	Wine grape	extracellular, plastid	46.91	52.3
CDY20309	Canola	cytosol	40.72	51.97
Bra032099.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	41.75	51.92
KRH52624	Soybean	cytosol	46.39	51.43
CDY46146	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	41.24	51.28
KRH61964	Soybean	cytosol	46.39	51.14
TraesCS6D01G102200.1	Wheat	mitochondrion	47.42	47.92
AT4G31310.2	Thale cress	cytosol	40.21	44.83
CDX72301	Canola	cytosol	40.21	44.32
Bra024014.1-P	Field mustard	cytosol	39.69	43.75
CDY13422	Canola	cytosol	39.69	43.75
Bra028440.1-P	Field mustard	nucleus	34.54	39.65
CDX67437	Canola	nucleus	34.54	39.65
CDX86400	Canola	cytosol	34.02	39.29
Bra025366.1-P	Field mustard	cytosol	33.51	38.69
CDX86398	Canola	cytosol	32.47	38.65
Bra025368.1-P	Field mustard	cytosol	32.47	38.65
CDY11660	Canola	cytosol	33.51	38.24
CDY56031	Canola	cytosol	32.47	37.95
CDY04047	Canola	cytosol, extracellular, plastid	32.47	37.72
Bra033070.1-P	Field mustard	cytosol	32.47	37.5
CDY44424	Canola	cytosol	32.47	37.5
CDX74433	Canola	cytosol	31.96	37.35
Bra033071.1-P	Field mustard	cytosol	31.96	37.13
CDY44423	Canola	cytosol	31.96	37.13
AT5G39720.1	Thale cress	cytosol	31.44	36.97
CDY04046	Canola	cytosol	31.96	36.9
CDX86401	Canola	cytosol	31.96	36.9
Bra025365.1-P	Field mustard	cytosol	31.96	36.9
Bra025649.1-P	Field mustard	cytosol	26.8	36.88
AT3G28950.1	Thale cress	cytosol	30.93	36.36
CDX86399	Canola	cytosol, nucleus, plastid	31.44	36.31
Bra025367.1-P	Field mustard	cytosol	31.44	36.31
AT5G39730.1	Thale cress	cytosol	31.96	36.05
AT3G28940.1	Thale cress	cytosol	30.93	35.5
CDX74432	Canola	cytosol	30.93	35.29
AT3G28930.1	Thale cress	cytosol	30.93	35.29
CDY56032	Canola	cytosol	30.41	34.71
Bra025647.1-P	Field mustard	mitochondrion	28.35	30.56
CDX85232	Canola	cytosol	31.96	8.99

Protein Annotations

EnsemblPlants:TraesCS7D01G409600.2	EnsemblPlantsGene:TraesCS7D01G409600	Gene3D:3.10.490.10	InterPro:AIG2-like	InterPro:GGCT-like	InterPro:GGCT-like_sf
PANTHER:PTHR31544	PANTHER:PTHR31544:SF3	PFAM:PF06094	SEG:seg	SUPFAM:SSF110857	TIGR:cd06661
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chr7D:+:528130893..528133318

Molecular Weight (calculated)

21703.8 Da

IEP (calculated)

4.642

GRAVY (calculated)

-0.187

Length

194 amino acids

Sequence
(BLAST)

001: MAATPPAAAA AAAGGAHSVF VYGSLMADEV VSAILKRIPA SSPALLANHH RFNVKDRIYP AILPVESKKV AGKVIMGISD AELIVLDAFE DFEYVRRRVQ
101: ISLTMVLLKE SLALQDTSET MHADTYVWSD AEDPDLYGEW DFEEWKRVHM KDFLTMTLGF MDGLERPEPK TRVETYQSFM HEHEQPESGT QVES

Best Arabidopsis Sequence Match ( AT2G24390.3 )
(BLAST)

001: MSGTVTMHSV FVYGSLMADD VVRLLLNRIP QTASATLPDF HRFSIKGRVY PAIIPAKSDK VSGKVLFGIT DDELNVLDEF EDVEYERENV QDSSDEKLQT
101: KTYVWAKKDD PDLYGTWDFE EWKQLHMEGF LKMTKEFAEE LNLPKSEI

Arabidopsis Description

AIG2LDAIG2-like protein D [Source:UniProtKB/Swiss-Prot;Acc:A8MRP2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.