Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- extracellular 1
- endoplasmic reticulum 2
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX86399 | Canola | cytosol, nucleus, plastid | 23.04 | 94.64 |
| CDY04047 | Canola | cytosol, extracellular, plastid | 21.3 | 88.02 |
| CDY44423 | Canola | cytosol | 21.16 | 87.43 |
| CDX86401 | Canola | cytosol | 19.57 | 80.36 |
| CDY04046 | Canola | cytosol | 19.28 | 79.17 |
| CDY44424 | Canola | cytosol | 19.13 | 78.57 |
| CDX86400 | Canola | cytosol | 19.13 | 78.57 |
| AT3G28930.1 | Thale cress | cytosol | 18.84 | 76.47 |
| AT3G28940.1 | Thale cress | cytosol | 18.7 | 76.33 |
| CDX74433 | Canola | cytosol | 13.04 | 54.22 |
| CDY56031 | Canola | cytosol | 13.04 | 54.22 |
| CDY11660 | Canola | cytosol | 12.9 | 52.35 |
| CDX86398 | Canola | cytosol | 12.32 | 52.15 |
| CDX67437 | Canola | nucleus | 12.75 | 52.07 |
| CDX74432 | Canola | cytosol | 12.46 | 50.59 |
| CDY56032 | Canola | cytosol | 12.46 | 50.59 |
| CDY13422 | Canola | cytosol | 10.87 | 42.61 |
| CDX72301 | Canola | cytosol | 10.87 | 42.61 |
| CDY20309 | Canola | cytosol | 9.13 | 41.45 |
| PGSC0003DMT400076081 | Potato | endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole | 9.28 | 41.03 |
| CDY46146 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 9.13 | 40.38 |
| GSMUA_Achr8P24650_001 | Banana | mitochondrion | 8.7 | 39.74 |
| PGSC0003DMT400038470 | Potato | cytosol | 8.99 | 36.47 |
| Os02t0141000-01 | Rice | cytosol | 7.97 | 35.95 |
| Solyc08g006070.2.1 | Tomato | cytosol | 8.84 | 35.88 |
| GSMUA_Achr9P14100_001 | Banana | plastid | 8.7 | 35.5 |
| VIT_04s0008g02840.t01 | Wine grape | extracellular, plastid | 8.84 | 35.06 |
| Os06t0702700-01 | Rice | cytosol | 9.57 | 34.74 |
| Zm00001d015242_P002 | Maize | plastid | 7.68 | 34.64 |
| TraesCS7B01G316500.1 | Wheat | plastid | 8.99 | 33.88 |
| EES04498 | Sorghum | plastid | 7.25 | 32.68 |
| EER90333 | Sorghum | plastid | 8.55 | 32.6 |
| KRH52624 | Soybean | cytosol | 8.26 | 32.57 |
| KRH61964 | Soybean | cytosol | 8.26 | 32.39 |
| Zm00001d014692_P001 | Maize | plastid | 8.55 | 32.24 |
| TraesCS3A01G536600.1 | Wheat | endoplasmic reticulum, extracellular | 6.96 | 32.0 |
| TraesCS7D01G409600.2 | Wheat | plastid | 8.99 | 31.96 |
| TraesCS6B01G141200.1 | Wheat | plastid | 7.39 | 31.88 |
| TraesCS7A01G416300.1 | Wheat | plastid | 9.13 | 31.82 |
| TraesCS6D01G102200.1 | Wheat | mitochondrion | 7.83 | 28.12 |
| TraesCS6A01G113100.1 | Wheat | cytosol, extracellular, mitochondrion, plastid | 7.83 | 27.98 |
| HORVU6Hr1G020320.5 | Barley | mitochondrion | 7.68 | 27.32 |
Protein Annotations
| EnsemblPlants:CDX85232 | EnsemblPlantsGene:GSBRNA2T00142870001 | Gene3D:3.10.490.10 | InterPro:AIG2-like | InterPro:GGCT-like | InterPro:GGCT-like_sf |
| PFAM:PF06094 | ProteinID:CDX85232 | ProteinID:CDX85232.1 | SEG:seg | SUPFAM:SSF110857 | UniParc:UPI0004EEA6B1 |
| MapMan:35.1 | : | : | : | : | : |
Description
BnaC07g25430D
Coordinates
chrLK031841:-:518574..530241
Molecular Weight (calculated)
79419.5 Da
IEP (calculated)
4.936
GRAVY (calculated)
-0.492
Length
690 amino acids
Sequence
(BLAST)
(BLAST)
001: MSGSDVPSHN LFVYGSILEP AAAAVILDRP ADTVPALLHG YHKYKLKGRP YPCIVPFESA KVNGKVITGV SDAELNKFDV IEGNEYERVT VEVVRMDNSE
101: KMKVETYVWV NKDDPSMYGE WDYEEWRMIH ADKFVEMFRE VLEWNKNPNG KTREDIVKSL KKKMSSSDQS SSHNVFVYGS FQEPAVVGLI LECTPVIVSA
201: QLHGFHRYRL KGRLHPCIAP LETGVIDGKV LTGLTDAQLE SLDMIEGDEY MRKTVEVLLT DTSDNMQVEA FIWANKDDPD MYGEWDFEEW KRLHMEKFIE
301: ASEKFIEWKK NPDGRSREEF AKFVEEDPPF GGKKMATSEQ SPSYNVFVYG SFQEPAVVSL ILEFAPVIVS AQLHGFHLYR LKGRLHPCIA PFESGLVNGK
401: VLTGLTEAQL KNLDMIQGAE YVRKTVEVVL TETSEKMEVE ALIWANKDDP DMYGEWDFEE WKRLHMDKFI EASKKFIEWK KNPDGKTREE FEKFVHEDPP
501: VARNGGNERT GANSILKGVC FLGRYNRSRE RTMILLKERF QEPSVVNLIL ECDPVTISAQ LQGYHLYRLK GRLHPCISPS ENGLINGKIL TGLTDAQLEN
601: LDMIEGDEYV RKTVEVVLTE TSEKMQVETF VWANKDDPHL YGEWDFEEWK KVHMEKFIEA SKKFIEWKKN PEGRSREEFV KFVEEDLTAA
101: KMKVETYVWV NKDDPSMYGE WDYEEWRMIH ADKFVEMFRE VLEWNKNPNG KTREDIVKSL KKKMSSSDQS SSHNVFVYGS FQEPAVVGLI LECTPVIVSA
201: QLHGFHRYRL KGRLHPCIAP LETGVIDGKV LTGLTDAQLE SLDMIEGDEY MRKTVEVLLT DTSDNMQVEA FIWANKDDPD MYGEWDFEEW KRLHMEKFIE
301: ASEKFIEWKK NPDGRSREEF AKFVEEDPPF GGKKMATSEQ SPSYNVFVYG SFQEPAVVSL ILEFAPVIVS AQLHGFHLYR LKGRLHPCIA PFESGLVNGK
401: VLTGLTEAQL KNLDMIQGAE YVRKTVEVVL TETSEKMEVE ALIWANKDDP DMYGEWDFEE WKRLHMDKFI EASKKFIEWK KNPDGKTREE FEKFVHEDPP
501: VARNGGNERT GANSILKGVC FLGRYNRSRE RTMILLKERF QEPSVVNLIL ECDPVTISAQ LQGYHLYRLK GRLHPCISPS ENGLINGKIL TGLTDAQLEN
601: LDMIEGDEYV RKTVEVVLTE TSEKMQVETF VWANKDDPHL YGEWDFEEWK KVHMEKFIEA SKKFIEWKKN PEGRSREEFV KFVEEDLTAA
001: MTSSDPQSHN VFVYGSILEP AVAAVILDRT ADTVPAVLHG YHRYKLKGLP YPCIVSSDSG KVNGKVITGV SDAELNNFDV IEGNDYERVT VEVVRMDNSE
101: KVKVETYVWV NKDDPRMYGE WDFEEWRVVH AEKFVETFRK MLEWNKNPNG KSMEEAVGSL LSSGD
101: KVKVETYVWV NKDDPRMYGE WDFEEWRVVH AEKFVETFRK MLEWNKNPNG KSMEEAVGSL LSSGD
Arabidopsis Description
AIG2CProtein AIG2 C [Source:UniProtKB/Swiss-Prot;Acc:Q9MBH1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.