CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
plastid 4
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra033070.1-P	Field mustard	cytosol	100.0	100.0
CDY04046	Canola	cytosol	93.45	93.45
AT3G28940.1	Thale cress	cytosol	84.52	84.02
CDX86401	Canola	cytosol	83.93	83.93
AT3G28930.1	Thale cress	cytosol	81.55	80.59
CDX86399	Canola	cytosol, nucleus, plastid	80.36	80.36
CDY04047	Canola	cytosol, extracellular, plastid	79.17	79.64
CDX86400	Canola	cytosol	79.17	79.17
CDY44423	Canola	cytosol	77.98	78.44
CDY56031	Canola	cytosol	55.36	56.02
CDX74433	Canola	cytosol	54.76	55.42
CDX86398	Canola	cytosol	52.98	54.6
CDY11660	Canola	cytosol	54.76	54.12
CDX67437	Canola	nucleus	53.57	53.25
CDY56032	Canola	cytosol	52.98	52.35
CDX74432	Canola	cytosol	52.38	51.76
CDY13422	Canola	cytosol	43.45	41.48
CDX72301	Canola	cytosol	43.45	41.48
GSMUA_Achr8P24650_001	Banana	mitochondrion	36.31	40.4
CDY20309	Canola	cytosol	36.31	40.13
CDY46146	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	36.31	39.1
PGSC0003DMT400076081	Potato	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	35.71	38.46
GSMUA_Achr9P14100_001	Banana	plastid	38.1	37.87
PGSC0003DMT400038470	Potato	cytosol	36.9	36.47
VIT_04s0008g02840.t01	Wine grape	extracellular, plastid	37.5	36.21
Os02t0141000-01	Rice	cytosol	32.74	35.95
Solyc08g006070.2.1	Tomato	cytosol	36.31	35.88
Zm00001d015242_P002	Maize	plastid	31.55	34.64
TraesCS7B01G316500.1	Wheat	plastid	37.5	34.43
Os06t0702700-01	Rice	cytosol	38.1	33.68
EER90333	Sorghum	plastid	35.71	33.15
KRH52624	Soybean	cytosol	34.52	33.14
KRH61964	Soybean	cytosol	34.52	32.95
Zm00001d014692_P001	Maize	plastid	35.71	32.79
EES04498	Sorghum	plastid	29.76	32.68
TraesCS7D01G409600.2	Wheat	plastid	37.5	32.47
TraesCS7A01G416300.1	Wheat	plastid	38.1	32.32
TraesCS6B01G141200.1	Wheat	plastid	30.36	31.88
TraesCS3A01G536600.1	Wheat	endoplasmic reticulum, extracellular	26.79	30.0
TraesCS6D01G102200.1	Wheat	mitochondrion	30.95	27.08
TraesCS6A01G113100.1	Wheat	cytosol, extracellular, mitochondrion, plastid	30.36	26.42
HORVU6Hr1G020320.5	Barley	mitochondrion	30.36	26.29
CDX85232	Canola	cytosol	78.57	19.13

Protein Annotations

EnsemblPlants:CDY44424	EnsemblPlantsGene:GSBRNA2T00080111001	Gene3D:3.10.490.10	InterPro:AIG2-like	InterPro:GGCT-like	InterPro:GGCT-like_sf
PANTHER:PTHR31544	PFAM:PF06094	ProteinID:CDY44424	ProteinID:CDY44424.1	SUPFAM:SSF110857	UniParc:UPI0002546E61
UniProt:A0A078I4G2	MapMan:35.1	:	:	:	:

Description

BnaA02g29530DBnaA02g29530D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I4G2]

Coordinates

chrLK032588:+:209503..210627

Molecular Weight (calculated)

19259.7 Da

IEP (calculated)

4.813

GRAVY (calculated)

-0.535

Length

168 amino acids

Sequence
(BLAST)

001: MTSSDQSLSH NVFVYGSFQE PSVVSLILGC NPVAVSAQLH GFHVYRLKGR LHACISPSEN GLSNGKILTG LTDGQLDNLD MIEGDEYVRK TVEVVLNDTS
101: EKMKVETYVW ANKDDPDMYG EWDFEEWKRL HMEKFIEAAK KFIEWKKNPD GRSREEFEKY VHEDPIVA

Best Arabidopsis Sequence Match ( AT3G28940.1 )
(BLAST)

001: MTSSDKSLSH DVFVYGSFQE PSVVNLILEC SPVMVPAQLH GYHVYRLKGR LHACISPSEN GLINGKILTG LTDSQLENLD MIEGSEYVRK TVEVVLTDTS
101: EKKQVETYVW ANKDDPNLYG EWDFEEWRRL HMDKFIEAST KFIEWKKNPD GRSREEFEKF VFDDPPTAA

Arabidopsis Description

AIG2BProtein AIG2 B [Source:UniProtKB/Swiss-Prot;Acc:Q9MBH2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.