CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra025365.1-P	Field mustard	cytosol	100.0	100.0
CDY04046	Canola	cytosol	84.52	84.52
AT3G28940.1	Thale cress	cytosol	84.52	84.02
CDY44424	Canola	cytosol	83.93	83.93
AT3G28930.1	Thale cress	cytosol	83.93	82.94
CDX86399	Canola	cytosol, nucleus, plastid	82.74	82.74
CDY04047	Canola	cytosol, extracellular, plastid	80.36	80.84
CDY44423	Canola	cytosol	79.76	80.24
CDX86400	Canola	cytosol	78.57	78.57
CDX86398	Canola	cytosol	53.57	55.21
CDX74433	Canola	cytosol	54.17	54.82
CDY56031	Canola	cytosol	54.17	54.82
CDY11660	Canola	cytosol	54.17	53.53
CDX67437	Canola	nucleus	52.98	52.66
CDY56032	Canola	cytosol	52.98	52.35
CDX74432	Canola	cytosol	52.38	51.76
CDY13422	Canola	cytosol	45.24	43.18
CDX72301	Canola	cytosol	45.24	43.18
GSMUA_Achr8P24650_001	Banana	mitochondrion	36.31	40.4
CDY20309	Canola	cytosol	36.31	40.13
CDY46146	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	36.31	39.1
PGSC0003DMT400076081	Potato	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	35.12	37.82
Solyc08g006070.2.1	Tomato	cytosol	37.5	37.06
VIT_04s0008g02840.t01	Wine grape	extracellular, plastid	38.1	36.78
GSMUA_Achr9P14100_001	Banana	plastid	36.9	36.69
PGSC0003DMT400038470	Potato	cytosol	36.9	36.47
Os06t0702700-01	Rice	cytosol	39.88	35.26
TraesCS7B01G316500.1	Wheat	plastid	38.1	34.97
KRH52624	Soybean	cytosol	36.31	34.86
KRH61964	Soybean	cytosol	36.31	34.66
Zm00001d015242_P002	Maize	plastid	31.55	34.64
Os02t0141000-01	Rice	cytosol	31.55	34.64
Zm00001d014692_P001	Maize	plastid	37.5	34.43
EER90333	Sorghum	plastid	36.9	34.25
EES04498	Sorghum	plastid	29.76	32.68
TraesCS7D01G409600.2	Wheat	plastid	36.9	31.96
TraesCS7A01G416300.1	Wheat	plastid	37.5	31.82
TraesCS6B01G141200.1	Wheat	plastid	29.76	31.25
TraesCS3A01G536600.1	Wheat	endoplasmic reticulum, extracellular	25.0	28.0
TraesCS6D01G102200.1	Wheat	mitochondrion	30.36	26.56
TraesCS6A01G113100.1	Wheat	cytosol, extracellular, mitochondrion, plastid	29.76	25.91
HORVU6Hr1G020320.5	Barley	mitochondrion	29.17	25.26
CDX85232	Canola	cytosol	80.36	19.57

Protein Annotations

EnsemblPlants:CDX86401	EnsemblPlantsGene:GSBRNA2T00144534001	Gene3D:3.10.490.10	InterPro:AIG2-like	InterPro:GGCT-like	InterPro:GGCT-like_sf
PANTHER:PTHR31544	PFAM:PF06094	ProteinID:CDX86401	ProteinID:CDX86401.1	SUPFAM:SSF110857	UniParc:UPI000253FAEC
MapMan:35.1	:	:	:	:	:

Description

BnaA06g31180D

Coordinates

chrLK031845:+:1343275..1344995

Molecular Weight (calculated)

19395.9 Da

IEP (calculated)

4.722

GRAVY (calculated)

-0.512

Length

168 amino acids

Sequence
(BLAST)

001: MTSSNQSPSH NVFVYGSFQE PSVVNLILEC DPVTISAQLH GYHLYRLKGR LHPCISPSEN GLINGKILTG LTDAQLENLD MIEGDEYVRK TVEVVLTETS
101: EKMQVETFVW ANKDDPHLYG EWDFEEWKKL HMEKFIEASK KFIEWKKNPD GRSREEFVKF VEEDITAA

Best Arabidopsis Sequence Match ( AT3G28930.3 )
(BLAST)

001: MTSSDQSPSH DVFVYGSFQE PAVVNLILEC APVMVSAQLH GYHLYRLKGR LHPCISPSDN GLINGKILTG LTDSQLESLD MIEGTEYVRK TVEVVLTDTL
101: EKKQVETIVW ANKDDPNMYG EWDFEEWKRL HMEKFIEAAT KFMEWKKNPN GRSREEFEKF VQDDSSPASA

Arabidopsis Description

AIG2AProtein AIG2 A [Source:UniProtKB/Swiss-Prot;Acc:P54121]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.