Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX74433 | Canola | cytosol | 97.59 | 97.59 |
| CDY11660 | Canola | cytosol | 79.52 | 77.65 |
| CDX67437 | Canola | nucleus | 78.31 | 76.92 |
| AT5G39730.1 | Thale cress | cytosol | 76.51 | 73.84 |
| CDX74432 | Canola | cytosol | 72.29 | 70.59 |
| CDY56032 | Canola | cytosol | 71.08 | 69.41 |
| CDY04047 | Canola | cytosol, extracellular, plastid | 59.04 | 58.68 |
| CDY44423 | Canola | cytosol | 58.43 | 58.08 |
| CDY44424 | Canola | cytosol | 56.02 | 55.36 |
| CDY04046 | Canola | cytosol | 55.42 | 54.76 |
| CDX86401 | Canola | cytosol | 54.82 | 54.17 |
| CDX86399 | Canola | cytosol, nucleus, plastid | 54.82 | 54.17 |
| CDX86398 | Canola | cytosol | 53.01 | 53.99 |
| CDX86400 | Canola | cytosol | 53.01 | 52.38 |
| GSMUA_Achr8P24650_001 | Banana | mitochondrion | 38.55 | 42.38 |
| CDY46146 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 39.76 | 42.31 |
| Os02t0141000-01 | Rice | cytosol | 37.95 | 41.18 |
| CDX72301 | Canola | cytosol | 43.37 | 40.91 |
| CDY20309 | Canola | cytosol | 37.35 | 40.79 |
| CDY13422 | Canola | cytosol | 42.77 | 40.34 |
| Zm00001d015242_P002 | Maize | plastid | 36.75 | 39.87 |
| GSMUA_Achr9P14100_001 | Banana | plastid | 38.55 | 37.87 |
| PGSC0003DMT400076081 | Potato | endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole | 35.54 | 37.82 |
| EES04498 | Sorghum | plastid | 34.34 | 37.25 |
| PGSC0003DMT400038470 | Potato | cytosol | 37.95 | 37.06 |
| Solyc08g006070.2.1 | Tomato | cytosol | 37.35 | 36.47 |
| Zm00001d014692_P001 | Maize | plastid | 39.16 | 35.52 |
| VIT_04s0008g02840.t01 | Wine grape | extracellular, plastid | 36.75 | 35.06 |
| TraesCS6B01G141200.1 | Wheat | plastid | 33.73 | 35.0 |
| TraesCS7B01G316500.1 | Wheat | plastid | 38.55 | 34.97 |
| EER90333 | Sorghum | plastid | 37.95 | 34.81 |
| Os06t0702700-01 | Rice | cytosol | 38.55 | 33.68 |
| KRH61964 | Soybean | cytosol | 34.94 | 32.95 |
| KRH52624 | Soybean | cytosol | 34.34 | 32.57 |
| TraesCS7D01G409600.2 | Wheat | plastid | 37.95 | 32.47 |
| TraesCS7A01G416300.1 | Wheat | plastid | 37.95 | 31.82 |
| TraesCS6D01G102200.1 | Wheat | mitochondrion | 34.34 | 29.69 |
| HORVU6Hr1G020320.5 | Barley | mitochondrion | 34.34 | 29.38 |
| TraesCS3A01G536600.1 | Wheat | endoplasmic reticulum, extracellular | 26.51 | 29.33 |
| TraesCS6A01G113100.1 | Wheat | cytosol, extracellular, mitochondrion, plastid | 33.73 | 29.02 |
| CDX85232 | Canola | cytosol | 54.22 | 13.04 |
Protein Annotations
| EnsemblPlants:CDY56031 | EnsemblPlantsGene:GSBRNA2T00017692001 | Gene3D:3.10.490.10 | InterPro:AIG2-like | InterPro:GGCT-like | InterPro:GGCT-like_sf |
| PANTHER:PTHR31544 | PFAM:PF06094 | ProteinID:CDY56031 | ProteinID:CDY56031.1 | SUPFAM:SSF110857 | UniParc:UPI0003E63E30 |
| UniProt:A0A078IZN9 | MapMan:35.1 | : | : | : | : |
Description
BnaC04g55830DBnaC04g55830D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IZN9]
Coordinates
chrLK033449:+:20570..21925
Molecular Weight (calculated)
19235.8 Da
IEP (calculated)
4.758
GRAVY (calculated)
-0.629
Length
166 amino acids
Sequence
(BLAST)
(BLAST)
001: MSGSGAQLHN VFVYGSFQEP EVVKVMLDRS PEIISVTLPG FKRFRLKGRL YPCVIPSEDG EVHGKLLMGL TDEELENVDA VEGNEYERVT VGVVREDNSE
101: KMTVKTYIWI NKDDPDIDGE WDFEEWKRLH MKKFIETFKE IMEWKRNPQG KGRDDFNHVL RDAPSA
101: KMTVKTYIWI NKDDPDIDGE WDFEEWKRLH MKKFIETFKE IMEWKRNPQG KGRDDFNHVL RDAPSA
001: MCSSDSLQLH NVFVYGSFQD PDVINVMLDR TPEIVSATLP GFQRFRLKGR LYPCIVPSEK GEVHGKVLMG VTSDELENLD AVEGNEYERV TVGIVREDNS
101: EKMAVKTYMW INKADPDMFG EWNFEEWKRL HKKKFIETFK KIMECKKKPQ GQGNDDISHV LREDQ
101: EKMAVKTYMW INKADPDMFG EWNFEEWKRL HKKKFIETFK KIMECKKKPQ GQGNDDISHV LREDQ
Arabidopsis Description
AIG2LAAt5g39720 [Source:UniProtKB/TrEMBL;Acc:A2RVP6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.