Factsheet for PGSC0003DMT400038470

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
plastid 2
cytosol 4
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	nucleus
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	cytosol, nucleus, plastid
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc08g006070.2.1	Tomato	cytosol	94.71	94.71
PGSC0003DMT400076081	Potato	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	67.65	73.72
GSMUA_Achr8P24650_001	Banana	mitochondrion	56.47	63.58
VIT_04s0008g02840.t01	Wine grape	extracellular, plastid	62.35	60.92
KRH61964	Soybean	cytosol	62.35	60.23
GSMUA_Achr9P14100_001	Banana	plastid	59.41	59.76
Bra032099.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	54.71	59.62
KRH52624	Soybean	cytosol	61.18	59.43
AT2G24390.1	Thale cress	cytosol	52.94	59.21
CDY20309	Canola	cytosol	52.94	59.21
CDY46146	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	54.12	58.97
Os02t0141000-01	Rice	cytosol	48.82	54.25
EER90333	Sorghum	plastid	57.65	54.14
Zm00001d014692_P001	Maize	plastid	57.06	53.01
AT4G31310.2	Thale cress	cytosol	53.53	52.3
TraesCS6B01G141200.1	Wheat	plastid	48.24	51.25
TraesCS7B01G316500.1	Wheat	plastid	54.12	50.27
EES04498	Sorghum	plastid	44.12	49.02
Os06t0702700-01	Rice	cytosol	54.71	48.95
CDX72301	Canola	cytosol	50.0	48.3
TraesCS7D01G409600.2	Wheat	plastid	54.12	47.42
CDY13422	Canola	cytosol	48.82	47.16
Bra024014.1-P	Field mustard	cytosol	48.82	47.16
TraesCS7A01G416300.1	Wheat	plastid	54.12	46.46
Zm00001d015242_P002	Maize	plastid	41.18	45.75
HORVU6Hr1G020320.5	Barley	mitochondrion	48.82	42.78
TraesCS6A01G113100.1	Wheat	cytosol, extracellular, mitochondrion, plastid	48.24	42.49
TraesCS6D01G102200.1	Wheat	mitochondrion	47.65	42.19
Bra033071.1-P	Field mustard	cytosol	39.41	40.12
CDY44423	Canola	cytosol	39.41	40.12
CDY04047	Canola	cytosol, extracellular, plastid	38.82	39.52
CDX86398	Canola	cytosol	37.65	39.26
Bra025368.1-P	Field mustard	cytosol	37.65	39.26
CDX67437	Canola	nucleus	38.82	39.05
Bra028440.1-P	Field mustard	nucleus	38.82	39.05
AT5G39730.1	Thale cress	cytosol	39.41	38.95
CDY11660	Canola	cytosol	38.82	38.82
AT5G39720.1	Thale cress	cytosol	37.06	38.18
TraesCS3A01G536600.1	Wheat	endoplasmic reticulum, extracellular	33.53	38.0
CDY56031	Canola	cytosol	37.06	37.95
CDX74433	Canola	cytosol	37.06	37.95
CDX74432	Canola	cytosol	37.65	37.65
Bra025649.1-P	Field mustard	cytosol	31.18	37.59
CDX86400	Canola	cytosol	37.06	37.5
Bra025366.1-P	Field mustard	cytosol	37.06	37.5
CDY56032	Canola	cytosol	37.06	37.06
AT3G28950.1	Thale cress	cytosol	35.88	36.97
Bra033070.1-P	Field mustard	cytosol	36.47	36.9
Bra025365.1-P	Field mustard	cytosol	36.47	36.9
CDX86401	Canola	cytosol	36.47	36.9
CDY44424	Canola	cytosol	36.47	36.9
AT3G28940.1	Thale cress	cytosol	36.47	36.69
CDX86399	Canola	cytosol, nucleus, plastid	35.88	36.31
Bra025367.1-P	Field mustard	cytosol	35.29	35.71
CDY04046	Canola	cytosol	35.29	35.71
AT3G28930.1	Thale cress	cytosol	35.29	35.29
Bra025647.1-P	Field mustard	mitochondrion	32.35	30.56
CDX85232	Canola	cytosol	36.47	8.99

Protein Annotations

EnsemblPlants:PGSC0003DMT400038470	EnsemblPlantsGene:PGSC0003DMG400014847	EntrezGene:102601297	Gene3D:3.10.490.10	InterPro:AIG2-like	InterPro:GGCT-like
InterPro:GGCT-like_sf	PANTHER:PTHR31544	PANTHER:PTHR31544:SF3	PFAM:PF06094	PGSC:PGSC0003DMG400014847	RefSeq:XP_006357027.1
SUPFAM:SSF110857	UniParc:UPI000294A305	UniProt:M1B6X2	MapMan:35.1	:	:

Description

Protein AIG2 [Source:PGSC_GENE;Acc:PGSC0003DMG400014847]

Coordinates

chr8:-:2606194..2611562

Molecular Weight (calculated)

19597.5 Da

IEP (calculated)

4.921

GRAVY (calculated)

-0.320

Length

170 amino acids

Sequence
(BLAST)

001: MATSPQSVFN VFVYGSLLAD DIVRALLKRV PPSNPAILHN FHRFSIKGRV YPAILPVENK RVNGKVLLDI TVPELNILDA FEDVEYERTT VDVSLMDRSK
101: TLQVETYVWV NKMDPDLHGE WDFEEWKVLH KGDFLKMTMG FSEEMELPES KTRVATCESF YAQEENKSKP

Best Arabidopsis Sequence Match ( AT4G31310.1 )
(BLAST)

001: MLSGKAAYDL FVYGSLQEPE VVYVLLNRVP DHVSAVLSGF HRFRLKGRVY PTILPDGTGK VNGKVLKGIT DDELKMLDEF EDVEYDRKTV EVMLTDTSEK
101: LQVETYVWKN KDDPDLYGEW DFEEWRQHDK EDFVTATKKF LENRRLPEAK TRMDTFKTFF KQDLENGKPL DS

Arabidopsis Description

AIG2-like (avirulence induced gene) family protein [Source:TAIR;Acc:AT4G31310]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.