Factsheet for TraesCS6B01G141200.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G113100.1	Wheat	cytosol, extracellular, mitochondrion, plastid	96.88	80.31
TraesCS6D01G102200.1	Wheat	mitochondrion	95.0	79.17
HORVU6Hr1G020320.5	Barley	mitochondrion	92.5	76.29
Os02t0141000-01	Rice	cytosol	71.88	75.16
EES04498	Sorghum	plastid	65.0	67.97
Zm00001d015242_P002	Maize	plastid	63.12	66.01
GSMUA_Achr8P24650_001	Banana	mitochondrion	58.75	62.25
CDY20309	Canola	cytosol	54.38	57.24
Bra032099.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	53.12	54.49
CDY46146	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	52.5	53.85
TraesCS3A01G536600.1	Wheat	endoplasmic reticulum, extracellular	50.0	53.33
AT2G24390.1	Thale cress	cytosol	50.62	53.29
PGSC0003DMT400076081	Potato	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	51.88	53.21
TraesCS7B01G316500.1	Wheat	plastid	58.12	50.82
Solyc08g006070.2.1	Tomato	cytosol	51.88	48.82
PGSC0003DMT400038470	Potato	cytosol	51.25	48.24
VIT_04s0008g02840.t01	Wine grape	extracellular, plastid	51.25	47.13
KRH61964	Soybean	cytosol	48.75	44.32
KRH52624	Soybean	cytosol	47.5	43.43
AT4G31310.2	Thale cress	cytosol	46.25	42.53
CDY13422	Canola	cytosol	45.62	41.48
CDX72301	Canola	cytosol	45.62	41.48
Bra024014.1-P	Field mustard	cytosol	45.62	41.48
CDY56031	Canola	cytosol	35.0	33.73
CDX67437	Canola	nucleus	35.62	33.73
Bra028440.1-P	Field mustard	nucleus	35.62	33.73
CDY11660	Canola	cytosol	35.62	33.53
CDX74433	Canola	cytosol	34.38	33.13
AT5G39720.1	Thale cress	cytosol	33.75	32.73
Bra025649.1-P	Field mustard	cytosol	28.12	31.91
CDX74432	Canola	cytosol	33.75	31.76
CDX86398	Canola	cytosol	31.88	31.29
Bra025368.1-P	Field mustard	cytosol	31.88	31.29
CDY56032	Canola	cytosol	33.12	31.18
CDY04047	Canola	cytosol, extracellular, plastid	31.88	30.54
CDX86399	Canola	cytosol, nucleus, plastid	31.88	30.36
CDY44424	Canola	cytosol	31.88	30.36
Bra033070.1-P	Field mustard	cytosol	31.88	30.36
Bra025367.1-P	Field mustard	cytosol	31.88	30.36
AT3G28950.1	Thale cress	cytosol	31.25	30.3
CDY44423	Canola	cytosol	31.25	29.94
Bra033071.1-P	Field mustard	cytosol	31.25	29.94
CDX86401	Canola	cytosol	31.25	29.76
CDX86400	Canola	cytosol	31.25	29.76
Bra025365.1-P	Field mustard	cytosol	31.25	29.76
AT5G39730.1	Thale cress	cytosol	31.88	29.65
Bra025366.1-P	Field mustard	cytosol	30.62	29.17
CDY04046	Canola	cytosol	30.0	28.57
AT3G28940.1	Thale cress	cytosol	30.0	28.4
AT3G28930.1	Thale cress	cytosol	30.0	28.24
Bra025647.1-P	Field mustard	mitochondrion	30.0	26.67
CDX85232	Canola	cytosol	31.88	7.39

Protein Annotations

EnsemblPlants:TraesCS6B01G141200.1	EnsemblPlantsGene:TraesCS6B01G141200	Gene3D:3.10.490.10	InterPro:AIG2-like	InterPro:GGCT-like	InterPro:GGCT-like_sf
ncoils:Coil	PANTHER:PTHR31544	PANTHER:PTHR31544:SF3	PFAM:PF06094	SEG:seg	SUPFAM:SSF110857
TIGR:cd06661	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr6B:+:140595384..140596804

Molecular Weight (calculated)

18037.2 Da

IEP (calculated)

4.262

GRAVY (calculated)

-0.314

Length

160 amino acids

Sequence
(BLAST)

001: MASPPPPAPA AAAAHSVFVY GTLMAEEVVR VLLGRVPPSS PALLPNHQRL SIRGRVYPAI LPVDGSKVPG KVWKGITDRE LDVLDIFEDE QYVRETVGIS
101: LTDSADTMIA YTYIWGNVDD PDLYGEWDFD EWKKVHLKDY FTMTQDFKEE LEQLESETHD

Best Arabidopsis Sequence Match ( AT2G24390.1 )
(BLAST)

001: MSGTVTMHSV FVYGSLMADD VVRLLLNRIP QTASATLPDF HRFSIKGRVY PAIIPAKSDK VSGKVLFGIT DDELNVLDEF EDVEYERENV QVLLTDSSDE
101: KLQTKTYVWA KKDDPDLYGT WDFEEWKQLH MEGFLKMTKE FAEELNLPKS EI

Arabidopsis Description

AIG2LDAIG2-like protein D [Source:UniProtKB/Swiss-Prot;Acc:A8MRP2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.