Subcellular Localization
min:
: max
Winner_takes_all: plastid, extracellular, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- plastid 2
- mitochondrion 1
- extracellular 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY44423 | Canola | cytosol | 97.6 | 97.6 |
| CDX86399 | Canola | cytosol, nucleus, plastid | 89.82 | 89.29 |
| CDX86400 | Canola | cytosol | 84.43 | 83.93 |
| CDX86401 | Canola | cytosol | 80.84 | 80.36 |
| CDY44424 | Canola | cytosol | 79.64 | 79.17 |
| CDY04046 | Canola | cytosol | 79.64 | 79.17 |
| AT3G28930.1 | Thale cress | cytosol | 78.44 | 77.06 |
| AT3G28940.1 | Thale cress | cytosol | 76.65 | 75.74 |
| CDX74433 | Canola | cytosol | 58.68 | 59.04 |
| CDY56031 | Canola | cytosol | 58.68 | 59.04 |
| CDX86398 | Canola | cytosol | 57.48 | 58.9 |
| CDY11660 | Canola | cytosol | 58.68 | 57.65 |
| CDX67437 | Canola | nucleus | 57.48 | 56.8 |
| CDX74432 | Canola | cytosol | 56.29 | 55.29 |
| CDY56032 | Canola | cytosol | 56.29 | 55.29 |
| CDX72301 | Canola | cytosol | 46.71 | 44.32 |
| CDY20309 | Canola | cytosol | 40.12 | 44.08 |
| CDY13422 | Canola | cytosol | 46.11 | 43.75 |
| CDY46146 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 40.72 | 43.59 |
| GSMUA_Achr8P24650_001 | Banana | mitochondrion | 37.13 | 41.06 |
| PGSC0003DMT400076081 | Potato | endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole | 38.32 | 41.03 |
| PGSC0003DMT400038470 | Potato | cytosol | 39.52 | 38.82 |
| Solyc08g006070.2.1 | Tomato | cytosol | 38.92 | 38.24 |
| Os02t0141000-01 | Rice | cytosol | 34.73 | 37.91 |
| GSMUA_Achr9P14100_001 | Banana | plastid | 37.72 | 37.28 |
| EER90333 | Sorghum | plastid | 38.32 | 35.36 |
| Zm00001d015242_P002 | Maize | plastid | 32.34 | 35.29 |
| VIT_04s0008g02840.t01 | Wine grape | extracellular, plastid | 36.53 | 35.06 |
| TraesCS7B01G316500.1 | Wheat | plastid | 37.72 | 34.43 |
| EES04498 | Sorghum | plastid | 31.14 | 33.99 |
| Os06t0702700-01 | Rice | cytosol | 38.32 | 33.68 |
| Zm00001d014692_P001 | Maize | plastid | 36.53 | 33.33 |
| KRH52624 | Soybean | cytosol | 34.73 | 33.14 |
| KRH61964 | Soybean | cytosol | 34.73 | 32.95 |
| TraesCS7D01G409600.2 | Wheat | plastid | 37.72 | 32.47 |
| TraesCS7A01G416300.1 | Wheat | plastid | 38.32 | 32.32 |
| TraesCS6B01G141200.1 | Wheat | plastid | 30.54 | 31.88 |
| TraesCS3A01G536600.1 | Wheat | endoplasmic reticulum, extracellular | 26.95 | 30.0 |
| TraesCS6D01G102200.1 | Wheat | mitochondrion | 32.34 | 28.12 |
| TraesCS6A01G113100.1 | Wheat | cytosol, extracellular, mitochondrion, plastid | 31.74 | 27.46 |
| HORVU6Hr1G020320.5 | Barley | mitochondrion | 31.74 | 27.32 |
| CDX85232 | Canola | cytosol | 88.02 | 21.3 |
Protein Annotations
| EnsemblPlants:CDY04047 | EnsemblPlantsGene:GSBRNA2T00117642001 | Gene3D:3.10.490.10 | InterPro:AIG2-like | InterPro:GGCT-like | InterPro:GGCT-like_sf |
| PANTHER:PTHR31544 | PFAM:PF06094 | ProteinID:CDY04047 | ProteinID:CDY04047.1 | SUPFAM:SSF110857 | UniParc:UPI0004EEFED7 |
| MapMan:35.1 | : | : | : | : | : |
Description
BnaC02g37620D
Coordinates
chrLK031948:-:769914..771372
Molecular Weight (calculated)
19180.8 Da
IEP (calculated)
4.724
GRAVY (calculated)
-0.396
Length
167 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSSVSPSHN VFVYGSFQEP AVVGLILECT PVIVSAQLHG FHRYRLKGRL HPCIAPFETG VINGKVLTGL TDAQLENLDM IEGDEYERKT VEVVLTDTLE
101: KMEVEAFIWA NKDDPDMYGE WDFEEWKRLH MEKFIEASKK FIEWKKNPNG KTREEFAKFV NEDPPVA
101: KMEVEAFIWA NKDDPDMYGE WDFEEWKRLH MEKFIEASKK FIEWKKNPNG KTREEFAKFV NEDPPVA
001: MTSSDQSPSH DVFVYGSFQE PAVVNLILEC APVMVSAQLH GYHLYRLKGR LHPCISPSDN GLINGKILTG LTDSQLESLD MIEGTEYVRK TVEVVLTDTL
101: EKKQVETIVW ANKDDPNMYG EWDFEEWKRL HMEKFIEAAT KFMEWKKNPN GRSREEFEKF VQDDSSPASA
101: EKKQVETIVW ANKDDPNMYG EWDFEEWKRL HMEKFIEAAT KFMEWKKNPN GRSREEFEKF VQDDSSPASA
Arabidopsis Description
AIG2AProtein AIG2 A [Source:UniProtKB/Swiss-Prot;Acc:P54121]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.