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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 4
  • cytosol 2
  • mitochondrion 1
  • plastid 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra024014.1-P Field mustard cytosol 100.0 100.0
CDX72301 Canola cytosol 97.16 97.16
AT4G31310.2 Thale cress cytosol 73.3 74.14
CDY20309 Canola cytosol 48.86 56.58
CDY46146 Canola cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 48.3 54.49
GSMUA_Achr8P24650_001 Banana mitochondrion 46.02 53.64
VIT_04s0008g02840.t01 Wine grape extracellular, plastid 52.27 52.87
Os02t0141000-01 Rice cytosol 45.45 52.29
KRH61964 Soybean cytosol 49.43 49.43
GSMUA_Achr9P14100_001 Banana plastid 47.16 49.11
Solyc08g006070.2.1 Tomato cytosol 47.16 48.82
PGSC0003DMT400038470 Potato cytosol 47.16 48.82
KRH52624 Soybean cytosol 48.3 48.57
PGSC0003DMT400076081 Potato endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole 42.61 48.08
CDY04047 Canola cytosol, extracellular, plastid 43.75 46.11
CDY44423 Canola cytosol 43.75 46.11
TraesCS6B01G141200.1 Wheat plastid 41.48 45.62
CDX86401 Canola cytosol 43.18 45.24
EER90333 Sorghum plastid 46.02 44.75
CDX86399 Canola cytosol, nucleus, plastid 42.61 44.64
EES04498 Sorghum plastid 38.07 43.79
CDY44424 Canola cytosol 41.48 43.45
CDY04046 Canola cytosol 41.48 43.45
TraesCS7B01G316500.1 Wheat plastid 44.89 43.17
Zm00001d015242_P002 Maize plastid 37.5 43.14
CDX86400 Canola cytosol 40.91 42.86
CDY56031 Canola cytosol 40.34 42.77
Zm00001d014692_P001 Maize plastid 44.32 42.62
CDY11660 Canola cytosol 40.91 42.35
CDX74433 Canola cytosol 39.77 42.17
CDX86398 Canola cytosol 38.64 41.72
CDX67437 Canola nucleus 39.77 41.42
Os06t0702700-01 Rice cytosol 43.75 40.53
TraesCS7D01G409600.2 Wheat plastid 43.75 39.69
CDX74432 Canola cytosol 38.07 39.41
CDY56032 Canola cytosol 38.07 39.41
TraesCS3A01G536600.1 Wheat endoplasmic reticulum, extracellular 33.52 39.33
TraesCS7A01G416300.1 Wheat plastid 43.75 38.89
HORVU6Hr1G020320.5 Barley mitochondrion 42.05 38.14
TraesCS6A01G113100.1 Wheat cytosol, extracellular, mitochondrion, plastid 41.48 37.82
TraesCS6D01G102200.1 Wheat mitochondrion 40.91 37.5
CDX85232 Canola cytosol 42.61 10.87
Protein Annotations
EnsemblPlants:CDY13422EnsemblPlantsGene:GSBRNA2T00077701001Gene3D:3.10.490.10InterPro:AIG2-likeInterPro:GGCT-likeInterPro:GGCT-like_sf
PANTHER:PTHR31544PANTHER:PTHR31544:SF3PFAM:PF06094ProteinID:CDY13422ProteinID:CDY13422.1SUPFAM:SSF110857
UniParc:UPI0002540F0DUniProt:A0A078FK82MapMan:35.1:::
Description
BnaA03g51400DBnaA03g51400D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FK82]
Coordinates
chrLK032035:+:196775..198105
Molecular Weight (calculated)
20303.9 Da
IEP (calculated)
4.987
GRAVY (calculated)
-0.649
Length
176 amino acids
Sequence
(BLAST)
001: MSILSGKAAG HDLFVYGSLQ DPQVVNVLLN RVPDHSSAVL SGFHRFKIKN RLYPTILPDS TGKVTGKVLK GITDDERKLL DDFEDVEYDR KAVEVVLTDT
101: SEKLQVGTYV WRNKDDPDLY AEWDFEEWKL HDREAFITAT KKFMEERKLP EAKTRIDTFK TFFKQDDTED GKPLDS
Best Arabidopsis Sequence Match ( AT4G31310.2 )
(BLAST)
001: MSMLSGKAAY DLFVYGSLQE PEVVYVLLNR VPDHVSAVLS GFHRFRLKGR VYPTILPDGT GKVNGKVLKG ITDDELKMLD EFEDVEYDRK TVEVMLTDTS
101: EKLQVETYVW KNKDDPDLYG EWDFEEWRQH DKEDFVTATK KFLENRRLPE AKTRMDTFKT FFKQDLENGK PLDS
Arabidopsis Description
AIG2-like (avirulence induced gene) family protein [Source:TAIR;Acc:AT4G31310]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.