CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY46146	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	94.74	92.31
AT2G24390.1	Thale cress	cytosol	80.92	80.92
GSMUA_Achr8P24650_001	Banana	mitochondrion	61.18	61.59
PGSC0003DMT400076081	Potato	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	60.53	58.97
Os02t0141000-01	Rice	cytosol	58.55	58.17
Zm00001d015242_P002	Maize	plastid	57.24	56.86
EES04498	Sorghum	plastid	56.58	56.21
TraesCS6B01G141200.1	Wheat	plastid	57.24	54.38
Solyc08g006070.2.1	Tomato	cytosol	59.21	52.94
PGSC0003DMT400038470	Potato	cytosol	59.21	52.94
KRH52624	Soybean	cytosol	59.87	52.0
VIT_04s0008g02840.t01	Wine grape	extracellular, plastid	59.21	51.72
KRH61964	Soybean	cytosol	59.87	51.7
GSMUA_Achr9P14100_001	Banana	plastid	56.58	50.89
CDX72301	Canola	cytosol	56.58	48.86
CDY13422	Canola	cytosol	56.58	48.86
EER90333	Sorghum	plastid	56.58	47.51
HORVU6Hr1G020320.5	Barley	mitochondrion	59.87	46.91
TraesCS6A01G113100.1	Wheat	cytosol, extracellular, mitochondrion, plastid	59.21	46.63
TraesCS6D01G102200.1	Wheat	mitochondrion	57.89	45.83
Os06t0702700-01	Rice	cytosol	56.58	45.26
Zm00001d014692_P001	Maize	plastid	53.95	44.81
TraesCS7B01G316500.1	Wheat	plastid	52.63	43.72
TraesCS3A01G536600.1	Wheat	endoplasmic reticulum, extracellular	42.11	42.67
TraesCS7D01G409600.2	Wheat	plastid	51.97	40.72
CDY04047	Canola	cytosol, extracellular, plastid	44.08	40.12
TraesCS7A01G416300.1	Wheat	plastid	51.97	39.9
CDY44423	Canola	cytosol	42.76	38.92
CDX86399	Canola	cytosol, nucleus, plastid	42.11	38.1
CDX74433	Canola	cytosol	41.45	37.95
CDX67437	Canola	nucleus	42.11	37.87
CDX74432	Canola	cytosol	42.11	37.65
CDY56032	Canola	cytosol	42.11	37.65
CDY56031	Canola	cytosol	40.79	37.35
CDY11660	Canola	cytosol	41.45	37.06
CDX86400	Canola	cytosol	40.79	36.9
CDY44424	Canola	cytosol	40.13	36.31
CDX86401	Canola	cytosol	40.13	36.31
CDY04046	Canola	cytosol	39.47	35.71
CDX86398	Canola	cytosol	36.84	34.36
CDX85232	Canola	cytosol	41.45	9.13

Protein Annotations

EnsemblPlants:CDY20309	EnsemblPlantsGene:GSBRNA2T00012239001	Gene3D:3.10.490.10	InterPro:AIG2-like	InterPro:GGCT-like	InterPro:GGCT-like_sf
PANTHER:PTHR31544	PANTHER:PTHR31544:SF3	PFAM:PF06094	ProteinID:CDY20309	ProteinID:CDY20309.1	SUPFAM:SSF110857
UniParc:UPI0004EDBCD6	UniProt:A0A078G4I8	MapMan:35.1	:	:	:

Description

BnaC04g36470DBnaC04g36470D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G4I8]

Coordinates

chrLK032105:+:515051..516136

Molecular Weight (calculated)

17481.7 Da

IEP (calculated)

4.211

GRAVY (calculated)

-0.276

Length

152 amino acids

Sequence
(BLAST)

001: MSGTVAMHSV FVYGSLMADD VVRLLLNRVP PTSPAILPDF HRFSIRGRVY PAILPAPADK VSGKVLFGIT DDELYILDEF EDIEYERENV NVFLTDSSEK
101: LETKAYIWAN KDDPDLYGTW DFEEWKQVHM EGFLKMTTEF AQEMKFPESS ET

Best Arabidopsis Sequence Match ( AT2G24390.1 )
(BLAST)

001: MSGTVTMHSV FVYGSLMADD VVRLLLNRIP QTASATLPDF HRFSIKGRVY PAIIPAKSDK VSGKVLFGIT DDELNVLDEF EDVEYERENV QVLLTDSSDE
101: KLQTKTYVWA KKDDPDLYGT WDFEEWKQLH MEGFLKMTKE FAEELNLPKS EI

Arabidopsis Description

AIG2LDAIG2-like protein D [Source:UniProtKB/Swiss-Prot;Acc:A8MRP2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.