CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

cytosol 4
nucleus 2
plastid 5
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d014692_P001	Maize	plastid	88.95	87.98
Os06t0702700-01	Rice	cytosol	75.14	71.58
GSMUA_Achr9P14100_001	Banana	plastid	63.54	68.05
TraesCS7B01G316500.1	Wheat	plastid	68.51	67.76
TraesCS7D01G409600.2	Wheat	plastid	69.06	64.43
TraesCS7A01G416300.1	Wheat	plastid	68.51	62.63
KRH52624	Soybean	cytosol	57.46	59.43
KRH61964	Soybean	cytosol	57.46	59.09
Solyc08g006070.2.1	Tomato	cytosol	54.14	57.65
PGSC0003DMT400038470	Potato	cytosol	54.14	57.65
VIT_04s0008g02840.t01	Wine grape	extracellular, plastid	55.25	57.47
AT2G24390.1	Thale cress	cytosol	47.51	56.58
CDY20309	Canola	cytosol	47.51	56.58
Bra032099.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	48.62	56.41
PGSC0003DMT400076081	Potato	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	48.07	55.77
CDY46146	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	48.07	55.77
EES04498	Sorghum	plastid	46.41	54.9
CDX72301	Canola	cytosol	45.3	46.59
Bra024014.1-P	Field mustard	cytosol	44.75	46.02
CDY13422	Canola	cytosol	44.75	46.02
AT4G31310.2	Thale cress	cytosol	44.2	45.98
Bra025368.1-P	Field mustard	cytosol	34.81	38.65
CDX86398	Canola	cytosol	34.81	38.65
CDY04047	Canola	cytosol, extracellular, plastid	35.36	38.32
AT3G28930.1	Thale cress	cytosol	35.91	38.24
CDY56031	Canola	cytosol	34.81	37.95
Bra033071.1-P	Field mustard	cytosol	34.81	37.72
CDY44423	Canola	cytosol	34.81	37.72
CDX86400	Canola	cytosol	34.81	37.5
CDX74433	Canola	cytosol	34.25	37.35
CDX67437	Canola	nucleus	34.81	37.28
AT3G28940.1	Thale cress	cytosol	34.81	37.28
Bra028440.1-P	Field mustard	nucleus	34.81	37.28
CDY11660	Canola	cytosol	34.81	37.06
CDX86401	Canola	cytosol	34.25	36.9
Bra025365.1-P	Field mustard	cytosol	34.25	36.9
Bra025366.1-P	Field mustard	cytosol	34.25	36.9
Bra025649.1-P	Field mustard	cytosol	28.73	36.88
AT5G39720.1	Thale cress	cytosol	32.6	35.76
AT3G28950.1	Thale cress	cytosol	32.6	35.76
CDX86399	Canola	cytosol, nucleus, plastid	33.15	35.71
Bra033070.1-P	Field mustard	cytosol	33.15	35.71
CDY44424	Canola	cytosol	33.15	35.71
Bra025367.1-P	Field mustard	cytosol	33.15	35.71
CDX74432	Canola	cytosol	33.15	35.29
CDY04046	Canola	cytosol	32.6	35.12
CDY56032	Canola	cytosol	32.6	34.71
AT5G39730.1	Thale cress	cytosol	32.04	33.72
Bra025647.1-P	Field mustard	mitochondrion	29.28	29.44
CDX85232	Canola	cytosol	32.6	8.55

Protein Annotations

EnsemblPlants:EER90333	EnsemblPlantsGene:SORBI_3010G253400	EntrezGene:8063841	Gene3D:3.10.490.10	InterPro:AIG2-like	InterPro:GGCT-like
InterPro:GGCT-like_sf	PANTHER:PTHR31544	PANTHER:PTHR31544:SF3	PFAM:PF06094	ProteinID:EER90333	ProteinID:EER90333.1
RefSeq:XP_002438966.1	SEG:seg	SUPFAM:SSF110857	UniParc:UPI0001A897BE	UniProt:C5Z983	MapMan:35.1

Description

hypothetical protein

Coordinates

chr10:-:59229924..59232193

Molecular Weight (calculated)

20469.4 Da

IEP (calculated)

4.390

GRAVY (calculated)

-0.340

Length

181 amino acids

Sequence
(BLAST)

001: MATTPPPPPA PAAAHTVFVY GSLMADEVVR TILKRVPPAA PALLPNYHRF NIKGRIYPAI LPVESKKVAG MVITGVTDEE LQLLDAFEDV EYTRTRVEIS
101: LTDSLEKILA DAYVWSDAED PNLYGEWDFE EWKKLHMKDF LAMTNGFMHE LEQPESKTRV ETYESFMQQQ EQPVPGTQVE G

Best Arabidopsis Sequence Match ( AT2G24390.1 )
(BLAST)

001: MSGTVTMHSV FVYGSLMADD VVRLLLNRIP QTASATLPDF HRFSIKGRVY PAIIPAKSDK VSGKVLFGIT DDELNVLDEF EDVEYERENV QVLLTDSSDE
101: KLQTKTYVWA KKDDPDLYGT WDFEEWKQLH MEGFLKMTKE FAEELNLPKS EI

Arabidopsis Description

AIG2LDAIG2-like protein D [Source:UniProtKB/Swiss-Prot;Acc:A8MRP2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.