Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY11660 | Canola | cytosol | 77.58 | 75.29 |
| Bra028440.1-P | Field mustard | nucleus | 76.97 | 75.15 |
| CDX67437 | Canola | nucleus | 76.97 | 75.15 |
| AT5G39730.1 | Thale cress | cytosol | 75.15 | 72.09 |
| AT3G28950.1 | Thale cress | cytosol | 52.12 | 52.12 |
| AT3G28930.1 | Thale cress | cytosol | 52.12 | 50.59 |
| AT3G28940.1 | Thale cress | cytosol | 51.52 | 50.3 |
| AT2G24390.1 | Thale cress | cytosol | 41.21 | 44.74 |
| AT4G31310.2 | Thale cress | cytosol | 44.85 | 42.53 |
| GSMUA_Achr8P24650_001 | Banana | mitochondrion | 38.79 | 42.38 |
| PGSC0003DMT400076081 | Potato | endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole | 38.18 | 40.38 |
| Os02t0141000-01 | Rice | cytosol | 35.15 | 37.91 |
| Solyc08g006070.2.1 | Tomato | cytosol | 38.18 | 37.06 |
| PGSC0003DMT400038470 | Potato | cytosol | 38.18 | 37.06 |
| GSMUA_Achr9P14100_001 | Banana | plastid | 37.58 | 36.69 |
| Zm00001d015242_P002 | Maize | plastid | 33.33 | 35.95 |
| VIT_04s0008g02840.t01 | Wine grape | extracellular, plastid | 37.58 | 35.63 |
| EES04498 | Sorghum | plastid | 31.52 | 33.99 |
| TraesCS6B01G141200.1 | Wheat | plastid | 32.73 | 33.75 |
| TraesCS7B01G316500.1 | Wheat | plastid | 36.97 | 33.33 |
| Zm00001d014692_P001 | Maize | plastid | 36.97 | 33.33 |
| Os06t0702700-01 | Rice | cytosol | 37.58 | 32.63 |
| EER90333 | Sorghum | plastid | 35.76 | 32.6 |
| KRH52624 | Soybean | cytosol | 33.94 | 32.0 |
| KRH61964 | Soybean | cytosol | 33.94 | 31.82 |
| TraesCS7D01G409600.2 | Wheat | plastid | 36.97 | 31.44 |
| TraesCS7A01G416300.1 | Wheat | plastid | 36.97 | 30.81 |
| TraesCS6D01G102200.1 | Wheat | mitochondrion | 33.33 | 28.65 |
| HORVU6Hr1G020320.5 | Barley | mitochondrion | 33.33 | 28.35 |
| TraesCS6A01G113100.1 | Wheat | cytosol, extracellular, mitochondrion, plastid | 32.73 | 27.98 |
| TraesCS3A01G536600.1 | Wheat | endoplasmic reticulum, extracellular | 24.85 | 27.33 |
Protein Annotations
| PDB:2G0Q | Gene3D:3.10.490.10 | MapMan:35.1 | EntrezGene:833968 | UniProt:A2RVP6 | ProteinID:AED94467.1 |
| InterPro:AIG2-like | Symbol:AIG2L | EMBL:AK175964 | ArrayExpress:AT5G39720 | EnsemblPlantsGene:AT5G39720 | RefSeq:AT5G39720 |
| TAIR:AT5G39720 | RefSeq:AT5G39720-TAIR-G | EnsemblPlants:AT5G39720.1 | TAIR:AT5G39720.1 | Unigene:At.30328 | ProteinID:BAB11378.1 |
| EMBL:BT021914 | EMBL:BT030037 | InterPro:GGCT-like | InterPro:GGCT-like_sf | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0008150 | GO:GO:0016740 | GO:GO:0016746 | RefSeq:NP_198788.1 | PFAM:PF06094 | PANTHER:PTHR31544 |
| UniProt:Q9FIX2 | SUPFAM:SSF110857 | UniParc:UPI00000A6847 | : | : | : |
Description
AIG2LAAt5g39720 [Source:UniProtKB/TrEMBL;Acc:A2RVP6]
Coordinates
chr5:+:15899618..15900667
Molecular Weight (calculated)
19103.8 Da
IEP (calculated)
5.354
GRAVY (calculated)
-0.594
Length
165 amino acids
Sequence
(BLAST)
(BLAST)
001: MCSSDSLQLH NVFVYGSFQD PDVINVMLDR TPEIVSATLP GFQRFRLKGR LYPCIVPSEK GEVHGKVLMG VTSDELENLD AVEGNEYERV TVGIVREDNS
101: EKMAVKTYMW INKADPDMFG EWNFEEWKRL HKKKFIETFK KIMECKKKPQ GQGNDDISHV LREDQ
101: EKMAVKTYMW INKADPDMFG EWNFEEWKRL HKKKFIETFK KIMECKKKPQ GQGNDDISHV LREDQ
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.