CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

cytosol 3
nucleus 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
mitochondrion 1
plastid 6

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	cytosol
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	cytosol, mitochondrion, plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d015242_P002	Maize	plastid	83.66	83.66
Os02t0141000-01	Rice	cytosol	69.28	69.28
TraesCS6B01G141200.1	Wheat	plastid	67.97	65.0
GSMUA_Achr8P24650_001	Banana	mitochondrion	62.09	62.91
CDY20309	Canola	cytosol	56.21	56.58
TraesCS6D01G102200.1	Wheat	mitochondrion	69.28	55.21
Bra032099.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	55.56	54.49
TraesCS6A01G113100.1	Wheat	cytosol, extracellular, mitochondrion, plastid	68.63	54.4
CDY46146	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	54.9	53.85
HORVU6Hr1G020320.5	Barley	mitochondrion	67.97	53.61
AT2G24390.1	Thale cress	cytosol	50.33	50.66
PGSC0003DMT400076081	Potato	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	49.67	48.72
EER90333	Sorghum	plastid	54.9	46.41
KRH61964	Soybean	cytosol	52.94	46.02
KRH52624	Soybean	cytosol	51.63	45.14
Solyc08g006070.2.1	Tomato	cytosol	49.67	44.71
VIT_04s0008g02840.t01	Wine grape	extracellular, plastid	50.33	44.25
PGSC0003DMT400038470	Potato	cytosol	49.02	44.12
TraesCS3A01G536600.1	Wheat	endoplasmic reticulum, extracellular	38.56	39.33
AT4G31310.2	Thale cress	cytosol	44.44	39.08
CDX72301	Canola	cytosol	44.44	38.64
Bra024014.1-P	Field mustard	cytosol	43.79	38.07
CDY13422	Canola	cytosol	43.79	38.07
CDY56031	Canola	cytosol	37.25	34.34
CDX74433	Canola	cytosol	36.6	33.73
CDX67437	Canola	nucleus	36.6	33.14
Bra028440.1-P	Field mustard	nucleus	36.6	33.14
CDX74432	Canola	cytosol	36.6	32.94
CDY11660	Canola	cytosol	36.6	32.94
Bra025649.1-P	Field mustard	cytosol	30.07	32.62
CDY56032	Canola	cytosol	35.95	32.35
Bra025367.1-P	Field mustard	cytosol	34.64	31.55
AT5G39720.1	Thale cress	cytosol	33.99	31.52
CDY04047	Canola	cytosol, extracellular, plastid	33.99	31.14
CDX86399	Canola	cytosol, nucleus, plastid	33.99	30.95
AT5G39730.1	Thale cress	cytosol	34.64	30.81
Bra025368.1-P	Field mustard	cytosol	32.68	30.67
CDX86398	Canola	cytosol	32.68	30.67
CDY44423	Canola	cytosol	33.33	30.54
Bra033071.1-P	Field mustard	cytosol	33.33	30.54
AT3G28940.1	Thale cress	cytosol	33.33	30.18
CDX86401	Canola	cytosol	32.68	29.76
CDY44424	Canola	cytosol	32.68	29.76
CDY04046	Canola	cytosol	32.68	29.76
CDX86400	Canola	cytosol	32.68	29.76
Bra033070.1-P	Field mustard	cytosol	32.68	29.76
Bra025365.1-P	Field mustard	cytosol	32.68	29.76
AT3G28950.1	Thale cress	cytosol	32.03	29.7
AT3G28930.1	Thale cress	cytosol	32.68	29.41
Bra025366.1-P	Field mustard	cytosol	32.03	29.17
Bra025647.1-P	Field mustard	mitochondrion	32.68	27.78
CDX85232	Canola	cytosol	32.68	7.25

Protein Annotations

EnsemblPlants:EES04498	EnsemblPlantsGene:SORBI_3004G037700	EntrezGene:8062824	Gene3D:3.10.490.10	InterPro:AIG2-like	InterPro:GGCT-like
InterPro:GGCT-like_sf	PANTHER:PTHR31544	PANTHER:PTHR31544:SF3	PFAM:PF06094	ProteinID:EES04498	ProteinID:EES04498.1
RefSeq:XP_002451522.1	SEG:seg	SUPFAM:SSF110857	UniParc:UPI0001A85464	UniProt:C5XUJ8	MapMan:35.1

Description

hypothetical protein

Coordinates

chr4:+:3056430..3057508

Molecular Weight (calculated)

17321.6 Da

IEP (calculated)

4.752

GRAVY (calculated)

-0.233

Length

153 amino acids

Sequence
(BLAST)

001: MASPPPVAAA AGPHSVFVYG TLIAEEVVRV LLGRAPPSSP AILADHRRFS IRGRVYPAIL PARGHAVSGK VLKELTDREL HVFDMFEDEE YVKTTVEVSL
101: ADAQEKSIAC AYIWGNERDP DLYGEWDFEE WRKVHLKDYL EMTQEFMQEL GQF

Best Arabidopsis Sequence Match ( AT2G24390.1 )
(BLAST)

001: MSGTVTMHSV FVYGSLMADD VVRLLLNRIP QTASATLPDF HRFSIKGRVY PAIIPAKSDK VSGKVLFGIT DDELNVLDEF EDVEYERENV QVLLTDSSDE
101: KLQTKTYVWA KKDDPDLYGT WDFEEWKQLH MEGFLKMTKE FAEELNLPKS EI

Arabidopsis Description

AIG2LDAIG2-like protein D [Source:UniProtKB/Swiss-Prot;Acc:A8MRP2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.