CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY56032	Canola	cytosol	97.65	97.65
Bra025647.1-P	Field mustard	mitochondrion	86.47	81.67
CDX74433	Canola	cytosol	70.59	72.29
CDY56031	Canola	cytosol	70.59	72.29
CDY11660	Canola	cytosol	69.41	69.41
CDX67437	Canola	nucleus	67.65	68.05
CDY04047	Canola	cytosol, extracellular, plastid	55.29	56.29
CDY44423	Canola	cytosol	54.71	55.69
CDX86399	Canola	cytosol, nucleus, plastid	52.35	52.98
CDY04046	Canola	cytosol	52.35	52.98
CDX86400	Canola	cytosol	51.76	52.38
CDX86401	Canola	cytosol	51.76	52.38
CDY44424	Canola	cytosol	51.76	52.38
CDX86398	Canola	cytosol	49.41	51.53
CDY46146	Canola	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	39.41	42.95
CDY20309	Canola	cytosol	37.65	42.11
GSMUA_Achr8P24650_001	Banana	mitochondrion	35.29	39.74
Os02t0141000-01	Rice	cytosol	35.29	39.22
Zm00001d015242_P002	Maize	plastid	35.29	39.22
CDX72301	Canola	cytosol	40.59	39.2
CDY13422	Canola	cytosol	39.41	38.07
PGSC0003DMT400076081	Potato	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	34.71	37.82
Solyc08g006070.2.1	Tomato	cytosol	37.65	37.65
PGSC0003DMT400038470	Potato	cytosol	37.65	37.65
EES04498	Sorghum	plastid	32.94	36.6
VIT_04s0008g02840.t01	Wine grape	extracellular, plastid	36.47	35.63
GSMUA_Achr9P14100_001	Banana	plastid	34.71	34.91
Zm00001d014692_P001	Maize	plastid	37.06	34.43
TraesCS6B01G141200.1	Wheat	plastid	31.76	33.75
EER90333	Sorghum	plastid	35.29	33.15
KRH52624	Soybean	cytosol	34.12	33.14
TraesCS7B01G316500.1	Wheat	plastid	35.29	32.79
KRH61964	Soybean	cytosol	33.53	32.39
TraesCS7D01G409600.2	Wheat	plastid	35.29	30.93
Os06t0702700-01	Rice	cytosol	34.12	30.53
TraesCS7A01G416300.1	Wheat	plastid	35.29	30.3
TraesCS3A01G536600.1	Wheat	endoplasmic reticulum, extracellular	25.88	29.33
HORVU6Hr1G020320.5	Barley	mitochondrion	32.94	28.87
TraesCS6D01G102200.1	Wheat	mitochondrion	31.76	28.12
TraesCS6A01G113100.1	Wheat	cytosol, extracellular, mitochondrion, plastid	31.18	27.46
CDX85232	Canola	cytosol	50.59	12.46

Protein Annotations

EnsemblPlants:CDX74432	EnsemblPlantsGene:GSBRNA2T00114290001	Gene3D:3.10.490.10	InterPro:AIG2-like	InterPro:GGCT-like	InterPro:GGCT-like_sf
PANTHER:PTHR31544	PFAM:PF06094	ProteinID:CDX74432	ProteinID:CDX74432.1	SEG:seg	SUPFAM:SSF110857
UniParc:UPI0004EEA5A6	MapMan:35.1	:	:	:	:

Description

BnaA04g09570D

Coordinates

chrLK031801:-:222549..223788

Molecular Weight (calculated)

19629.6 Da

IEP (calculated)

4.943

GRAVY (calculated)

-0.464

Length

170 amino acids

Sequence
(BLAST)

001: MSRSDAQLHD VFVYGSFQEP DIVNIMLERT PEIISVTLPG FKRFRLKGRL YPCIVPSEAG EVHGKVLMGL TDKELSNLDA VEGNEYEKVT VEVVRKENSA
101: KMIVKTYIWI NKNDPDMYGE WDFEEWKQLH MPKFMETIKE IIEINNNHQG KGVEDYTQIL HKNLGDAPLS

Best Arabidopsis Sequence Match ( AT5G39720.1 )
(BLAST)

001: MCSSDSLQLH NVFVYGSFQD PDVINVMLDR TPEIVSATLP GFQRFRLKGR LYPCIVPSEK GEVHGKVLMG VTSDELENLD AVEGNEYERV TVGIVREDNS
101: EKMAVKTYMW INKADPDMFG EWNFEEWKRL HKKKFIETFK KIMECKKKPQ GQGNDDISHV LREDQ

Arabidopsis Description

AIG2LAAt5g39720 [Source:UniProtKB/TrEMBL;Acc:A2RVP6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.