Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY44424 | Canola | cytosol | 93.45 | 93.45 |
| CDX86401 | Canola | cytosol | 84.52 | 84.52 |
| AT3G28940.1 | Thale cress | cytosol | 83.93 | 83.43 |
| CDX86399 | Canola | cytosol, nucleus, plastid | 80.95 | 80.95 |
| AT3G28930.1 | Thale cress | cytosol | 81.55 | 80.59 |
| CDX86400 | Canola | cytosol | 79.76 | 79.76 |
| CDY04047 | Canola | cytosol, extracellular, plastid | 79.17 | 79.64 |
| CDY44423 | Canola | cytosol | 77.98 | 78.44 |
| CDY56031 | Canola | cytosol | 54.76 | 55.42 |
| CDX74433 | Canola | cytosol | 54.17 | 54.82 |
| CDY11660 | Canola | cytosol | 54.17 | 53.53 |
| CDY56032 | Canola | cytosol | 53.57 | 52.94 |
| CDX67437 | Canola | nucleus | 52.98 | 52.66 |
| CDX74432 | Canola | cytosol | 52.98 | 52.35 |
| CDX86398 | Canola | cytosol | 50.6 | 52.15 |
| CDY13422 | Canola | cytosol | 43.45 | 41.48 |
| CDX72301 | Canola | cytosol | 43.45 | 41.48 |
| CDY20309 | Canola | cytosol | 35.71 | 39.47 |
| CDY46146 | Canola | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 35.71 | 38.46 |
| GSMUA_Achr8P24650_001 | Banana | mitochondrion | 34.52 | 38.41 |
| PGSC0003DMT400076081 | Potato | endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole | 33.33 | 35.9 |
| VIT_04s0008g02840.t01 | Wine grape | extracellular, plastid | 36.9 | 35.63 |
| GSMUA_Achr9P14100_001 | Banana | plastid | 35.71 | 35.5 |
| PGSC0003DMT400038470 | Potato | cytosol | 35.71 | 35.29 |
| Os02t0141000-01 | Rice | cytosol | 32.14 | 35.29 |
| Solyc08g006070.2.1 | Tomato | cytosol | 35.12 | 34.71 |
| Zm00001d015242_P002 | Maize | plastid | 31.55 | 34.64 |
| TraesCS7B01G316500.1 | Wheat | plastid | 36.9 | 33.88 |
| Os06t0702700-01 | Rice | cytosol | 37.5 | 33.16 |
| EES04498 | Sorghum | plastid | 29.76 | 32.68 |
| EER90333 | Sorghum | plastid | 35.12 | 32.6 |
| Zm00001d014692_P001 | Maize | plastid | 35.12 | 32.24 |
| KRH52624 | Soybean | cytosol | 33.33 | 32.0 |
| TraesCS7D01G409600.2 | Wheat | plastid | 36.9 | 31.96 |
| TraesCS7A01G416300.1 | Wheat | plastid | 37.5 | 31.82 |
| KRH61964 | Soybean | cytosol | 32.74 | 31.25 |
| TraesCS6B01G141200.1 | Wheat | plastid | 28.57 | 30.0 |
| TraesCS3A01G536600.1 | Wheat | endoplasmic reticulum, extracellular | 26.19 | 29.33 |
| TraesCS6D01G102200.1 | Wheat | mitochondrion | 29.17 | 25.52 |
| TraesCS6A01G113100.1 | Wheat | cytosol, extracellular, mitochondrion, plastid | 28.57 | 24.87 |
| HORVU6Hr1G020320.5 | Barley | mitochondrion | 28.57 | 24.74 |
| CDX85232 | Canola | cytosol | 79.17 | 19.28 |
Protein Annotations
| EnsemblPlants:CDY04046 | EnsemblPlantsGene:GSBRNA2T00117640001 | Gene3D:3.10.490.10 | InterPro:AIG2-like | InterPro:GGCT-like | InterPro:GGCT-like_sf |
| PANTHER:PTHR31544 | PFAM:PF06094 | ProteinID:CDY04046 | ProteinID:CDY04046.1 | SUPFAM:SSF110857 | UniParc:UPI0004EE32E0 |
| MapMan:35.1 | : | : | : | : | : |
Description
BnaC02g37610D
Coordinates
chrLK031948:-:761009..762289
Molecular Weight (calculated)
19372.9 Da
IEP (calculated)
4.644
GRAVY (calculated)
-0.501
Length
168 amino acids
Sequence
(BLAST)
(BLAST)
001: MTSSDQSLSH NVFVYGSFQE PPVVSLILEC NPVAVSAQLH GFRVYRLKGR LHACISPSEN GLTSGKILTG LTDGQLENLD MIEGDEYVRK TVEVVLTETS
101: EKMKVETYVW ANKDDPDMYG EWDFEEWKRL YMEKFIEAAK KFIEWKKNPD GRSREEFEKF VHEDPLVA
101: EKMKVETYVW ANKDDPDMYG EWDFEEWKRL YMEKFIEAAK KFIEWKKNPD GRSREEFEKF VHEDPLVA
001: MTSSDKSLSH DVFVYGSFQE PSVVNLILEC SPVMVPAQLH GYHVYRLKGR LHACISPSEN GLINGKILTG LTDSQLENLD MIEGSEYVRK TVEVVLTDTS
101: EKKQVETYVW ANKDDPNLYG EWDFEEWRRL HMDKFIEAST KFIEWKKNPD GRSREEFEKF VFDDPPTAA
101: EKKQVETYVW ANKDDPNLYG EWDFEEWRRL HMDKFIEAST KFIEWKKNPD GRSREEFEKF VFDDPPTAA
Arabidopsis Description
AIG2BProtein AIG2 B [Source:UniProtKB/Swiss-Prot;Acc:Q9MBH2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.