CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, endoplasmic reticulum, vacuole, cytosol, plasma membrane, golgi

Predictor Summary:

cytosol 3
plastid 2
extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, secretory
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	cytosol
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra032099.1-P	Field mustard	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	99.36	99.36
CDY20309	Canola	cytosol	92.31	94.74
AT2G24390.1	Thale cress	cytosol	75.64	77.63
GSMUA_Achr8P24650_001	Banana	mitochondrion	59.62	61.59
PGSC0003DMT400076081	Potato	endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole	59.62	59.62
Os02t0141000-01	Rice	cytosol	56.41	57.52
Zm00001d015242_P002	Maize	plastid	54.49	55.56
EES04498	Sorghum	plastid	53.85	54.9
PGSC0003DMT400038470	Potato	cytosol	58.97	54.12
Solyc08g006070.2.1	Tomato	cytosol	57.69	52.94
VIT_04s0008g02840.t01	Wine grape	extracellular, plastid	58.97	52.87
KRH52624	Soybean	cytosol	58.97	52.57
TraesCS6B01G141200.1	Wheat	plastid	53.85	52.5
KRH61964	Soybean	cytosol	58.97	52.27
GSMUA_Achr9P14100_001	Banana	plastid	55.77	51.48
CDX72301	Canola	cytosol	55.13	48.86
CDY13422	Canola	cytosol	54.49	48.3
EER90333	Sorghum	plastid	55.77	48.07
Zm00001d014692_P001	Maize	plastid	53.85	45.9
Os06t0702700-01	Rice	cytosol	55.77	45.79
HORVU6Hr1G020320.5	Barley	mitochondrion	56.41	45.36
TraesCS6A01G113100.1	Wheat	cytosol, extracellular, mitochondrion, plastid	55.77	45.08
TraesCS6D01G102200.1	Wheat	mitochondrion	54.49	44.27
TraesCS7B01G316500.1	Wheat	plastid	51.92	44.26
TraesCS7D01G409600.2	Wheat	plastid	51.28	41.24
CDY04047	Canola	cytosol, extracellular, plastid	43.59	40.72
TraesCS7A01G416300.1	Wheat	plastid	51.28	40.4
CDX74433	Canola	cytosol	42.95	40.36
TraesCS3A01G536600.1	Wheat	endoplasmic reticulum, extracellular	38.46	40.0
CDY56031	Canola	cytosol	42.31	39.76
CDY44423	Canola	cytosol	42.31	39.52
CDY56032	Canola	cytosol	42.95	39.41
CDX74432	Canola	cytosol	42.95	39.41
CDX67437	Canola	nucleus	41.67	38.46
CDX86399	Canola	cytosol, nucleus, plastid	41.03	38.1
CDY11660	Canola	cytosol	41.03	37.65
CDY44424	Canola	cytosol	39.1	36.31
CDX86401	Canola	cytosol	39.1	36.31
CDX86400	Canola	cytosol	39.1	36.31
CDY04046	Canola	cytosol	38.46	35.71
CDX86398	Canola	cytosol	37.18	35.58
CDX85232	Canola	cytosol	40.38	9.13

Protein Annotations

EnsemblPlants:CDY46146	EnsemblPlantsGene:GSBRNA2T00083322001	Gene3D:3.10.490.10	InterPro:AIG2-like	InterPro:GGCT-like	InterPro:GGCT-like_sf
PANTHER:PTHR31544	PANTHER:PTHR31544:SF3	PFAM:PF06094	ProteinID:CDY46146	ProteinID:CDY46146.1	SUPFAM:SSF110857
UniParc:UPI0004EF1A70	UniProt:A0A078I8G9	MapMan:35.1	:	:	:

Description

BnaA04g14340DBnaA04g14340D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I8G9]

Coordinates

chrLK032651:+:123610..124633

Molecular Weight (calculated)

17813.1 Da

IEP (calculated)

4.204

GRAVY (calculated)

-0.283

Length

156 amino acids

Sequence
(BLAST)

001: MSAMSGGPLA MHSVFVYGSL MADDVVRLLL NRVPPTSPGI LPDFHRFSIK GRVYPAILPA QADKVSGKVL FGITDDELYI LDEFEDIEYE RDNVNVFLTD
101: SSEKLETKAY IWANKDDPDL YGTWDFEEWK QVHMEGFLKM TTEFAQEMKF PESSET

Best Arabidopsis Sequence Match ( AT2G24390.1 )
(BLAST)

001: MSGTVTMHSV FVYGSLMADD VVRLLLNRIP QTASATLPDF HRFSIKGRVY PAIIPAKSDK VSGKVLFGIT DDELNVLDEF EDVEYERENV QVLLTDSSDE
101: KLQTKTYVWA KKDDPDLYGT WDFEEWKQLH MEGFLKMTKE FAEELNLPKS EI

Arabidopsis Description

AIG2LDAIG2-like protein D [Source:UniProtKB/Swiss-Prot;Acc:A8MRP2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.