Skip to main content
crop-pal logo
Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • plastid 1
  • cytosol 3
  • extracellular 3
  • endoplasmic reticulum 3
  • vacuole 3
  • plasma membrane 3
  • golgi 3
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY20309 Canola cytosol 80.92 80.92
Bra032099.1-P Field mustard cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 78.29 76.28
CDY46146 Canola cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole 77.63 75.64
GSMUA_Achr8P24650_001 Banana mitochondrion 59.87 60.26
PGSC0003DMT400076081 Potato endoplasmic reticulum, extracellular, golgi, plasma membrane, plastid, vacuole 57.24 55.77
Os02t0141000-01 Rice cytosol 55.92 55.56
VIT_04s0008g02840.t01 Wine grape extracellular, plastid 61.18 53.45
Solyc08g006070.2.1 Tomato cytosol 59.21 52.94
PGSC0003DMT400038470 Potato cytosol 59.21 52.94
Zm00001d015242_P002 Maize plastid 51.97 51.63
AT4G31310.2 Thale cress cytosol 58.55 51.15
GSMUA_Achr9P14100_001 Banana plastid 56.58 50.89
TraesCS6B01G141200.1 Wheat plastid 53.29 50.62
EES04498 Sorghum plastid 50.66 50.33
KRH52624 Soybean cytosol 57.24 49.71
KRH61964 Soybean cytosol 57.24 49.43
EER90333 Sorghum plastid 56.58 47.51
Zm00001d014692_P001 Maize plastid 55.26 45.9
Os06t0702700-01 Rice cytosol 56.58 45.26
TraesCS7B01G316500.1 Wheat plastid 51.97 43.17
TraesCS6A01G113100.1 Wheat cytosol, extracellular, mitochondrion, plastid 54.61 43.01
HORVU6Hr1G020320.5 Barley mitochondrion 53.95 42.27
TraesCS7D01G409600.2 Wheat plastid 53.95 42.27
TraesCS6D01G102200.1 Wheat mitochondrion 52.63 41.67
TraesCS7A01G416300.1 Wheat plastid 53.95 41.41
AT5G39720.1 Thale cress cytosol 44.74 41.21
TraesCS3A01G536600.1 Wheat endoplasmic reticulum, extracellular 40.13 40.67
AT5G39730.1 Thale cress cytosol 45.39 40.12
AT3G28930.1 Thale cress cytosol 42.11 37.65
AT3G28940.1 Thale cress cytosol 40.79 36.69
AT3G28950.1 Thale cress cytosol 39.47 36.36
Protein Annotations
Gene3D:3.10.490.10MapMan:35.1EntrezGene:816974UniProt:A0A178W3D8UniProt:A8MRP2ProteinID:AAD18111.1
ProteinID:AEC07568.1InterPro:AIG2-likeEMBL:AK227944ArrayExpress:AT2G24390EnsemblPlantsGene:AT2G24390RefSeq:AT2G24390
TAIR:AT2G24390RefSeq:AT2G24390-TAIR-GEnsemblPlants:AT2G24390.1TAIR:AT2G24390.1Unigene:At.39167InterPro:GGCT-like
InterPro:GGCT-like_sfGO:GO:0003674GO:GO:0003824GO:GO:0008150GO:GO:0016740GO:GO:0016746
RefSeq:NP_180015.3ProteinID:OAP11632.1PFAM:PF06094PO:PO:0000037PO:PO:0000293PO:PO:0007064
PO:PO:0007095PO:PO:0007103PO:PO:0007115PO:PO:0007123PO:PO:0007611PO:PO:0007616
PO:PO:0009025PO:PO:0009029PO:PO:0009031PO:PO:0009032PO:PO:0009046PO:PO:0009047
PO:PO:0020038PO:PO:0020100PO:PO:0020137PO:PO:0025022PANTHER:PTHR31544PANTHER:PTHR31544:SF3
SUPFAM:SSF110857UniParc:UPI00005DC2BF::::
Description
AIG2LDAIG2-like protein D [Source:UniProtKB/Swiss-Prot;Acc:A8MRP2]
Coordinates
chr2:+:10373731..10374998
Molecular Weight (calculated)
17484.7 Da
IEP (calculated)
4.411
GRAVY (calculated)
-0.359
Length
152 amino acids
Sequence
(BLAST)
001: MSGTVTMHSV FVYGSLMADD VVRLLLNRIP QTASATLPDF HRFSIKGRVY PAIIPAKSDK VSGKVLFGIT DDELNVLDEF EDVEYERENV QVLLTDSSDE
101: KLQTKTYVWA KKDDPDLYGT WDFEEWKQLH MEGFLKMTKE FAEELNLPKS EI
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.